Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1541 ATGAAGAACTTACCTCTCTACATCCTCCGATCTCCTCCGCGTTCTCTTCTCCGGTTGCCACTGCCGGTCGCCAGCCCCTTCTTGTCTCACCTCTCCTATTTCATAACCATCTCTCTCTTAGGCTTTGGAGCTCTAAAGCTCACCAAAACTAGAAACTCCTCCTCCCCAAATGACCTCAACATTTTCTTCACCTCCGTCTCTGCCGTCTCCGTTTCAAGCATGTCCGTCATCGAAATGGAAGTTTTTTCCAATTTCCAACTCCTCATCATCACCACCCTCATGTTCCTCGGCGGCGAAGTCTTCGTCTCTGCCGTCGGGTTCCAACTCTCTCGCCGGTTCAAATACCTGAACGAGAAAAACCAAGTCGATTCGGCTCGGTCCATTGAGATGGAAAGTGGGACATCGTCATCAACGACGGCCACCATTGATGAGTTGAGTATCTCAAAATCATGTTCAAAGCTTTTGAGTCGTACGATAATTGGATATCTTTTGACGACAAATGGTGTTGGTTCTTGTTTAATCTTCATTTACATCATCACGATCCCCCATGCAAAGCAAGTGCTTGAAAGCAAAGGCATCAACTTCCTTACTTTTTCAATTTTTAGTACAGTTTCTACTTTTACCAACTGTGGCTTCATACCTACAAATGAAAATATGATCGCTTTCAAGAACAACTCTGGCCTTTTGCTCATACTCATCTCGCAGGTGTTGTTGGGAGGTTGTTTATATCCGGTGGGTCTCCGGTTGGCAATAATGGCGGCGGCGAAGGTGACGGGGAAGAAGGAGTGGAGATACATATCGAAGAACTACTCAGAGATGGGGTATTCTCATCTCTTGTCGGGGCTCCGGTGTGGATTTCTAGCCGTGACGGCGGTGGGATTCATAATTTTACAATTGATTATCTTTTGCTCATTGGAATGGAACAACTCCGCCGGAATTTGGGATGGCCTGAATCCCTACCAGAAGTTTGTGGGATCACTTTTTCAGGTGACAAACTCAAGACATGCCGGAGAGTCGGTGGTGGATATCTCGGTCATCTCGCCCGCGATCTTGGTAGTTTTTGTTGTCATGATGTATCTCCCACCATACACAACCTTTTTACCCATAAGGAACAAAGAGATAGCTTCAATGTCACATGGGAAGGACAAAAGACAACACTTAGTGGAATTATTCACATTCTCACAGCTCTCCTATTTGGCCATTTTTATCATTCTCATATGCATCACAGAGAAAGAAAAGCTAAGAGATGATCCCCTTAACTTTACTGTTCTCAACATCACCCTTGAAGTGATCAGTGCATATGGAAATGTTGGGTTCTCAAGTGGGTATAGCTGCAAAAGACAAGTAAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGATTTGCTGGAAGATGGAGTCCAAAGGGAAAATTCATTCTAATTCTTGTCATGATCTTTGGAAGAATGAAAAGTTTTAGTATGCATAGTGGTAGAGCTTGGAAATTATCATGA 1494 44.11 MKNLPLYILRSPPRSLLRLPLPVASPFLSHLSYFITISLLGFGALKLTKTRNSSSPNDLNIFFTSVSAVSVSSMSVIEMEVFSNFQLLIITTLMFLGGEVFVSAVGFQLSRRFKYLNEKNQVDSARSIEMESGTSSSTTATIDELSISKSCSKLLSRTIIGYLLTTNGVGSCLIFIYIITIPHAKQVLESKGINFLTFSIFSTVSTFTNCGFIPTNENMIAFKNNSGLLLILISQVLLGGCLYPVGLRLAIMAAAKVTGKKEWRYISKNYSEMGYSHLLSGLRCGFLAVTAVGFIILQLIIFCSLEWNNSAGIWDGLNPYQKFVGSLFQVTNSRHAGESVVDISVISPAILVVFVVMMYLPPYTTFLPIRNKEIASMSHGKDKRQHLVELFTFSQLSYLAIFIILICITEKEKLRDDPLNFTVLNITLEVISAYGNVGFSSGYSCKRQVKVDSSCKDAWYGFAGRWSPKGKFILILVMIFGRMKSFSMHSGRAWKLS 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26877614 26882957 + CaPI482276_06g015410.1 Cam06g1541 129841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1541 497 Pfam Cation transport protein 46 488 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
Cam06g1541 497 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 21 494 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1539 Cam-Chr6:26834567 Cam06g1541 Cam-Chr6:26877614 2.50E-110 dispersed
Cam06g1540 Cam-Chr6:26842410 Cam06g1541 Cam-Chr6:26877614 2.70E-59 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1541 K24976 - csv:101206239 807.364