Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1581 ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGTACTTCTTCTTCTTCTTCCACTTCTACTTCTAATTTTGGTTCTAGTTCTGATTCTTCTGATCCTAATCTCAATTACCCTAATCACCATAAGTTTGACCATGTTGATAATGGTGGTGTTAATGGTGACCAATTGTTGAGTAGCGATTTACGCGCCCAATCAACCATTACCCACAAACGCAAACCTCTAAGGAAACAACCCCAACTTGGAGGAGAAGGGATTCTTGAGCAATTACCTGAGGAGGAGGACGACGATCTTGATTACTCTGCCTTGAAGCTCATCAAAGTTCCTAAACGGACAAATCACTTCAGACATCCTCCTCCTCCTGCTTTAATGGACTCCCACAAGAAGGGTGGGTTGGAAACAGAATTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATAATCGGTAAAGGCAGCTATGGGGTTGTCGGTTCCGCCGTTGATACCCATACTGATGAGAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTTTCTGATGCCACAAGGATTTTAAGAGAAATTAAACTCCTACGGCTGCTCCGTCATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGACCTTCACCAAGTAATTAAGGCCAATGATGATCTCACTCCTGAGCATCATCAGTTTTTCTTGTACCAGCTTCTTCGTGGTCTGAAATATATTCATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAACATTTTAGCTAATGCCGACTGCAAACTGAAAATTTGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCACCATCTGCTATTTTCTGGACTGACTATGTTGCGACTCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACTGGAAAACCGCTGTTTCCTGGGAAAAATGTGGTGCACCAACTGGATCTGATGACTGATGTGCTTGGCACACCTTCCGCTGAGTCCATTGCTAGGATTCGGAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTCCCCAATGCCGATCCCTTGGCTCTCCGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGATCGTCCCACTGCTGAAGAGGCATTAGCTGATCCGTATTTTCATGGTTTGGCTAACGTGGATCGGGAACCATCAACACAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAGTTAACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTACAGGAATATCTCCGCAGTGGAGAACAAACAAGCTTCATGTACCCAAGTGGGGTTGATCGTTTCAAACGCCAGTTTGCACATCTAGAGGAACATTACGGCAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCAAAAGACGAATCCGAACAACACAATGATTTAGAAGGAAGAAATGTTGCTACATCTCTTCAAAGTCCCCCAAAGTCGCAAGGAGATGGTTCTGAAAACGCAAACGGTAATGAACAAAATGGACCAAACAAGCCAAATTACAGTGCTCGTAGCCTGTTGAAGAGTGCCAGCATTAGTGCCTCTAAATGTATAGATGTTAAACCAAGAAAAGACCTAGAGGAGGAACCGATTACCGAGATGAATGATGAGGCAATTGACGGATTGTCTCATAAGGACATTTTGGCTACAAGGCAAAGTGTAGCGAAGTTTCTGAAGTCAGGTTGTTACCCTCGTGTAGCATGA 1974 42.6 MGSGTLVDGVRRWFQRRTSSSSSTSTSNFGSSSDSSDPNLNYPNHHKFDHVDNGGVNGDQLLSSDLRAQSTITHKRKPLRKQPQLGGEGILEQLPEEEDDDLDYSALKLIKVPKRTNHFRHPPPPALMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAVDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDESEQHNDLEGRNVATSLQSPPKSQGDGSENANGNEQNGPNKPNYSARSLLKSASISASKCIDVKPRKDLEEEPITEMNDEAIDGLSHKDILATRQSVAKFLKSGCYPRVA 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27299321 27304948 + CaPI482276_06g015810.1 Cam06g1581 129881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1581 657 MobiDBLite consensus disorder prediction 539 555 - -
Cam06g1581 657 ProSitePatterns MAP kinase signature. 185 288 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1581 657 MobiDBLite consensus disorder prediction 520 593 - -
Cam06g1581 657 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 147 482 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam06g1581 657 SMART serkin_6 150 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1581 657 MobiDBLite consensus disorder prediction 16 42 - -
Cam06g1581 657 Pfam Protein kinase domain 150 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1581 657 ProSitePatterns Protein kinases ATP-binding region signature. 156 180 IPR017441 GO:0005524(InterPro)
Cam06g1581 657 Gene3D Transferase(Phosphotransferase) domain 1 236 464 - -
Cam06g1581 657 FunFam Mitogen-activated protein kinase 465 487 - -
Cam06g1581 657 ProSiteProfiles Protein kinase domain profile. 150 441 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1581 657 MobiDBLite consensus disorder prediction 16 61 - -
Cam06g1581 657 FunFam Mitogen-activated protein kinase 236 464 - -
Cam06g1581 657 FunFam Mitogen-activated protein kinase 139 244 - -
Cam06g1581 657 Gene3D Phosphorylase Kinase; domain 1 166 487 - -
Cam06g1581 657 CDD STKc_TDY_MAPK 149 486 - -
Cam06g1581 657 MobiDBLite consensus disorder prediction 556 593 - -
Cam06g1581 657 SUPERFAMILY Protein kinase-like (PK-like) 146 446 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0579 Cam-Chr6:7831226 Cam06g1581 Cam-Chr6:27299321 1.70E-207 dispersed
Cam06g1581 Cam-Chr6:27299321 Cam09g2271 Cam-Chr9:37215197 3.50E-199 dispersed
Cam03g0989 Cam-Chr3:15754708 Cam06g1581 Cam-Chr6:27299321 5.40E-210 transposed
Cam07g0656 Cam-Chr7:12837282 Cam06g1581 Cam-Chr6:27299321 3.10E-208 transposed
Cam04g1098 Cam-Chr4:25137837 Cam06g1581 Cam-Chr6:27299321 2.90E-209 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85278 PF00069 Pkinase 1.90E-68 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1581 - - - 0.0