Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1639 ATGGTGGTTGAGAAACGCGGGAGGGTGTGTGTGTTGAAGAGGGGTGGAGGGCTTTTTGAGGTGAAGGAAGTTGTGGGTGGAGGAGGAATGACTTGGAGAAGAGTGTTGAAGTCCGTGCAGGCACTTTTGGCCCACGGTTCACTCTTCTGTTTCACGCTCTTGCTCGTTCTCAAGCTCGATCATTTCGTCTCCCACAGTTGGTGGGTTATATTTTTTCCCCTTTGGGTGTTTCATGTGGTTGTTGCTCGAGGAAGGTTCTCATTACCTGCCCCATCTCTTCCGCATAATCGTCATTGGGCACCGTGTCATGCTGTTGTTGCCACACCTTTGCTTATAGCATTTGAATTACTTCTTTGTATATACCTCGAAAGCCTATCTGTTTATGGTTTTGCTGCTGTGAACTTGAAGATTGTCTTTCTACCGTTGCTGGCATTTGAAATCATTGTTTTAATTGATAATTTCAGAATGTGTAGGTCACTGATGCCTGGTGACGATGAAAGCATGAGCGATGAGGCAATATGGGAGACACTGCCTCACTTTTGGATTGCTATTTCAATGGTCTTCTTTGTTGCTGCTACAGTATTTACTCTATTGAAGCTATGTGGGAATGTTGGTGCTCTTGGCTGGTGGGACTTATTTATAAATTTTGGCATTGCCGAATGCTTTGCGTTTCTTGTATGTACAAAGTGGTCTAATCCAGCGATTCATAGAAACATTCAGACAAGAGAACGTTGTTCATCATCAGCAGTAGTTAGATATCTAGATTGGAACAGTGGTCTAATAGTTTATCCAGAGCAGGATCAGCATCAGGACAGAATGTGTGGCCTTCAAGACATTGGAGGCCATATCATGAAAATTCCCATAATTGTTTTCCAAATCCTACTCTGCATGTATTTAGAGGGAACGCCTGCGGGTGCTAAAAGTATGCCACTTCCCGTCCTTTTCTCGCCCCTTTTTATATTGCAAGGTGCTGCTGTTATTTATGCTGCATCTAGATTGTTAGAGAAAGCTGTACTTCTGTTAAGAGGTGGATCTGGCACAGCATTGTATTTCAGTTTTTCAGTTAGGGCTCATGCCTGTTTGGAGTTCTTTCATCATGGTTCAAGGCTATTGGGGTGGTGGTCAATTGATGAAGGCAGTCGAGAGGAGCAGGCACGATTGTACCATGAGGGTGCCTCTGGGTACAATACTTTTAGTGGATATCCTCCTGAGATTGTGAAGAAGATGCCCAAGAAAGATCTAGCAGAGGAGGTCTGGCGCCTTCAAGCTGCACTTGGGGAGCAGACAGAAATCACCAAATACAGTCAGCAGGAATATGAAAGGCTTCAAAATGAAAAGGTGTTATGTCGGGTTTGTTTCGAGGGAGAAATTAGCGTGGTTCTTCTTCCATGTAGGCATCGCGTACTATGCAGTTCCTGCTGTGAGAAGTGTAAAAAGTGCCCAATATGTCGCGTCGTTATCGAAGAAAGATACTTGTTTCTCGTCGATCCAGATTGGTTCAGGCTGGAATTTGATTGTTACTGGGGTCGTCAGTCTAGGTTTTCCAGTACATTGTTTCGCCTGGCGCTGATTATATTCAGTGCGCACCTAAGTGGGGGAAAACACGTGAATTATTAG 1617 44.4 MVVEKRGRVCVLKRGGGLFEVKEVVGGGGMTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVIFFPLWVFHVVVARGRFSLPAPSLPHNRHWAPCHAVVATPLLIAFELLLCIYLESLSVYGFAAVNLKIVFLPLLAFEIIVLIDNFRMCRSLMPGDDESMSDEAIWETLPHFWIAISMVFFVAATVFTLLKLCGNVGALGWWDLFINFGIAECFAFLVCTKWSNPAIHRNIQTRERCSSSAVVRYLDWNSGLIVYPEQDQHQDRMCGLQDIGGHIMKIPIIVFQILLCMYLEGTPAGAKSMPLPVLFSPLFILQGAAVIYAASRLLEKAVLLLRGGSGTALYFSFSVRAHACLEFFHHGSRLLGWWSIDEGSREEQARLYHEGASGYNTFSGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISVVLLPCRHRVLCSSCCEKCKKCPICRVVIEERYLFLVDPDWFRLEFDCYWGRQSRFSSTLFRLALIIFSAHLSGGKHVNY 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27815723 27825861 - CaPI482276_06g016390.1 Cam06g1639 129939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1639 538 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 425 493 IPR013083 -
Cam06g1639 538 SMART ring_2 449 483 IPR001841 -
Cam06g1639 538 FunFam Kinesin-like protein KIN-7D, mitochondrial 426 494 - -
Cam06g1639 538 Pfam Transmembrane Fragile-X-F protein 57 321 IPR019396 -
Cam06g1639 538 Pfam Zinc finger, C3HC4 type (RING finger) 446 489 - -
Cam06g1639 538 SUPERFAMILY RING/U-box 440 490 - -
Cam06g1639 538 ProSiteProfiles Zinc finger RING-type profile. 449 484 IPR001841 -
Cam06g1639 538 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 30 491 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1639 - - - 0.0