Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1646 ATGGATGCTCGCCGAGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACCCTCCTAATTCCCCCGACCGCACCCTCTCCGGTCCCCCCAACTGTCTTCCTTCTCAACAATCCCTATCTCCTCCCACCAATTCCTTGTCTCCGGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTTGCCTCTCGTTCTGCTGTTCTTCCTGTTCCGGCTCCCGCTAATTGGAGGAATTCCGCCGATCAGATTCCTGTTGGTAGTTATAACCCTTCCGAGACGCTGCTTGCGACGTCCCCTATGGCGTCGCCTTCCAGTAGAATTGAGGATGAAGAGCTGGAGATGTCAGAGGATTCTTCCAACTCCGTATGGTATCGCCGGAGCGGTTCTGGGAAGATTGCCTCGAGCTTTCCTGGCGTTGGAATCCACATGGCGGTTAAGTCGTTGGAGAATTCGCAGGCACTGCCTCTTCAGACGTTGGAACCTAATAAGCCTGCTGGAGTTGCAGAAAGGAATGGAGGACCATCCACGGAGGTACAGAATCGACAACCACCACCAAATACTAAACCCTTGAAGGCAAAAACAACAAAGGCTGAAAGACGAGCTCTGCAGGAGGCACAACGAGCTGCAAAAGTCTCTGCAAAAGGTGAGGCTAATAAGTCAGGTACTGCTCCTGGTAAAGCTGTGAAGCAGCCAGCAGCTATGAAGGATAGCACTGCCACACCTTCGGTTGCACCAACTGACAAAAGAGGAGGTGATCGCACACTTGATAAAGAGAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGATAAAAGCAGGGTAGAAAAGGCTAAAAAACGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAACTTCCTGATCTCGTGTCAAAGTTTTTCCATCTTGACCCCATTCATCCTGCAATTTACAAGGTTGGTTTGCAATATATGGCCGGAGATATATGTGGGGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCTCTGGGTAGAGATTTAACTGCAAAAATTGGTAGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTATCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCGCATTGCCAAATTACCATTGAATCTTCCGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAAAAGATCATAATTGCAGATGAGGTCATAGTCAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTTTACTCACATATGGATCATCGTCTGCTGTAGAGATGCTTGTATTATATGCTCATGAGCTCGGAAAAGAATTTCGTGTTGTGGTGGTGGATTCCCGTCCAAAACAAGAAGGGCAAGCATTGCTTCGTAGGCTCATAGCGAGGGGCCTGAATTGTACATACACTCATATAAATGCCATTTCTTACGTGATGCATGAAGTAACTCGAGTTTTTCTAGGAGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGCCGTTGCCATGGTTGCAAATGCATTCCATGTTCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAACGAATTAGGTGATCCGGATGCTATCTCAAAGGTTCCAGAAAGGAAGGATATTAATTATCTAGATAATCTGACTGCTAAAGATCAACTGCAACTTCTAAATTTAATGTATGACGCTACACCTTCAGATTACATCTCAATGATCGTCACAGATTATGGCATGATTCCACCTACAAGCGTGCCAGTAATCGTGCGTGAGTACCGGAGAGAGCACCTGTGGATATAA 1962 46.08 MDARRGSRIVNPKVRQVGFFTLDPPNSPDRTLSGPPNCLPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSADQIPVGSYNPSETLLATSPMASPSSRIEDEELEMSEDSSNSVWYRRSGSGKIASSFPGVGIHMAVKSLENSQALPLQTLEPNKPAGVAERNGGPSTEVQNRQPPPNTKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTAPGKAVKQPAAMKDSTATPSVAPTDKRGGDRTLDKERKKDAPPPRMQFDDKSRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFHLDPIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGSYVSFFNECRPLSVSMGNAIRFLKNRIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSSAVEMLVLYAHELGKEFRVVVVDSRPKQEGQALLRRLIARGLNCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPERKDINYLDNLTAKDQLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27902161 27906605 - CaPI482276_06g016460.1 Cam06g1646 129946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1646 653 Gene3D - 439 646 IPR042529 -
Cam06g1646 653 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 46 650 - -
Cam06g1646 653 MobiDBLite consensus disorder prediction 161 286 - -
Cam06g1646 653 SUPERFAMILY NagB/RpiA/CoA transferase-like 300 646 IPR037171 -
Cam06g1646 653 MobiDBLite consensus disorder prediction 16 63 - -
Cam06g1646 653 MobiDBLite consensus disorder prediction 255 286 - -
Cam06g1646 653 Pfam Initiation factor 2 subunit family 346 636 IPR000649 GO:0044237(InterPro)
Cam06g1646 653 MobiDBLite consensus disorder prediction 179 195 - -
Cam06g1646 653 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1646 Cam-Chr6:27902161 Cam06g1647 Cam-Chr6:27910066 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1646 K03680 - csv:101215104 1220.3