Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1647 ATGGATGCTCGCCGAGGCTCTCGCGTCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACTCTCGACGCTCCTAATCCTCCCGGCCGCTCCCTCTCCGGTCCCGCCGACTGTGCCCCTTCTCAACAATCCCTCTCTCCTCCCACCAATTCCTTGTCTCCTGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTCGCCTCTCGCTCTGCTGTTTTTCCTGTTCCAGCTCCCGCCAATTGGAGGGATTCCGCCGATCATATTCATGTTGGCAGCTATAACCCCTCCGAAACACTGCTTGCTACGTCGCCTTCCACTAGAATTGGGGACGAAGAGCTGGACATGTCCGAGGATTCTTCCGCCTCCGTTCCATATCGCCGGAGTGGTTCCGGGAAGATTGCTTCGAGCTTTCCCGGCGTTGGAATCCACATGGCGGCTAAGTCGTCGGAGATTTCGCAGGCGCTGTTGGAACCTAATAAGGCTTTTGGAGTTGCAGAAAAGAATGGAGGGGCTTCCACAGAGGTACAAAATCGACAGTCACCATCAAATTCAAAACCCCTGAAGGCAAAAACGACAAAGGCTGAAAGACGAGCACTACAGGAGGCACAACGAGCTGCAAAAGGTGAAGCAAAGAAGCCAGGTAATGCCCCTGGTAAAGCTGTGAAGCAGCCCTCTGCAATGAGAGATAGCACTGCCACACCTTCGGTGGTATCTACTGACAAAAGAGGAGGTGATAGAACACATGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGATAAAAACAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATACGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGACCCTATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATTTACATGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCTTTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCTCTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCTCATTGCCAAACTACCATTGAATCTTCCAGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCAATCGCTTTATCAATGAAAAGATTATAATTGCAGATGAGGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCTTCATGTGCTGTAGAGATGCTTCTATTATATGCTCATGAGCTCGGAAAAGAATTTCGTGTTGTGGTGGTGGATTCCCGTCCAAAACTAGAAGGGCAAGCATTGCTTCGTAGGCTCATAGGGAGGGGGATAAGTTGTACATACACTCATATAAATGCTATTTCTTACGTGATGCAGAAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAACGGAACTGTATATTCAAGAGTGGGAACTGCAGCTGTTGCCATGGTTGCTAACGCATTCCATGTTCCAGTCTTAATCTGTTGTGAAGCCTATAAATTCCATGAAAGGGTACAACTTGATTCAATATGTTTCAATGAATTAGGTGATCCGGATACTATCTCAAAGGTTCCAGGAAGGAAGGATATTAATCTAGATAATTTGACTGCTAAAGAACAACTGCAACATCTAAATTTAATGTATGATGCCACGCCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCACCTACAAGTGTGCCAGTGATCGTGCGGGAGTATCGGAGAGAGCACCTGTGGATATAA 1923 45.87 MDARRGSRVVNPKVRQVGFFTLDAPNPPGRSLSGPADCAPSQQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVFPVPAPANWRDSADHIHVGSYNPSETLLATSPSTRIGDEELDMSEDSSASVPYRRSGSGKIASSFPGVGIHMAAKSSEISQALLEPNKAFGVAEKNGGASTEVQNRQSPSNSKPLKAKTTKAERRALQEAQRAAKGEAKKPGNAPGKAVKQPSAMRDSTATPSVVSTDKRGGDRTHDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDPIHPAIYKVGLQYMAGDLHGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNAIRFLKNLIAKLPLNLPESEVKATLCSDINRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIGRGISCTYTHINAISYVMQKVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDTISKVPGRKDINLDNLTAKEQLQHLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27910066 27916292 + CaPI482276_06g016470.1 Cam06g1647 129947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1647 640 MobiDBLite consensus disorder prediction 190 209 - -
Cam06g1647 640 MobiDBLite consensus disorder prediction 20 63 - -
Cam06g1647 640 MobiDBLite consensus disorder prediction 171 189 - -
Cam06g1647 640 MobiDBLite consensus disorder prediction 242 272 - -
Cam06g1647 640 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 46 637 - -
Cam06g1647 640 MobiDBLite consensus disorder prediction 36 51 - -
Cam06g1647 640 MobiDBLite consensus disorder prediction 96 138 - -
Cam06g1647 640 Pfam Initiation factor 2 subunit family 333 623 IPR000649 GO:0044237(InterPro)
Cam06g1647 640 MobiDBLite consensus disorder prediction 227 241 - -
Cam06g1647 640 MobiDBLite consensus disorder prediction 168 272 - -
Cam06g1647 640 SUPERFAMILY NagB/RpiA/CoA transferase-like 287 633 IPR037171 -
Cam06g1647 640 Gene3D - 427 633 IPR042529 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1646 Cam-Chr6:27902161 Cam06g1647 Cam-Chr6:27910066 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1647 K03680 - csv:101214144 1181.01