Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1651 ATGGTAGACGAAATAATGAATTTAAACTCTAATACTAAGAAATGCATATATCAACAATGCCCTTCCTCCACCACACCACCACCTCGATCGCCTCCTTCGATTCCGATCTTCTTCAACCGGTGGGATCGCCGTCGTCATTTTCCGGTTTCGCGTATTCGTTTTTTCCGTTGGCTTCTGGGACACCTCTCGAACCGGTTCGATATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAAATTATCAAAGAGATGTTACCCCCTGATGTACGGGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCCGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGCAGGACTCATTGAAAGGTGGGAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCTGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCACCGAAGCAACCGGAGCCTGAGCAAAGTTTAGAGAGCTAA 672 45.09 MVDEIMNLNSNTKKCIYQQCPSSTTPPPRSPPSIPIFFNRWDRRRHFPVSRIRFFRWLLGHLSNRFDMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27931917 27935715 - CaPI482276_06g016510.1 Cam06g1651 129951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1651 223 FunFam Negative cofactor 2 beta 73 210 - -
Cam06g1651 223 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 81 146 IPR003958 -
Cam06g1651 223 MobiDBLite consensus disorder prediction 201 223 - -
Cam06g1651 223 PANTHER PROTEIN DR1 HOMOLOG 68 221 IPR044255 -
Cam06g1651 223 SUPERFAMILY Histone-fold 79 209 IPR009072 GO:0046982(InterPro)
Cam06g1651 223 MobiDBLite consensus disorder prediction 207 223 - -
Cam06g1651 223 Gene3D Histone, subunit A 71 211 IPR009072 GO:0046982(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1651 Cam-Chr6:27931917 Cam09g0608 Cam-Chr9:5996688 4.90E-12 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52177 PF00808 CBFD_NFYB_HMF 5.80E-22 CL0012 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1651 K21751 - csv:101214627 303.138