Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1687 ATGGAAGTTAATACCTACAATGATCCATTACACAAAATTCTCTTTAAATGGGAATGTTACTCGCCTCGACAGCAAAAGATTGCACTCTTAGCACTTCTGATCTTTACAGCTTTCTATTCAACTGGGGCATACGATCCATTGGATCCAAATGGAAACATAACAATCAAATGGGATGTAGTCTCCTGGACGCCAGACGGATATGTAGCTGTAGTGACAATGAACAATTTTCAGATGTACCGCCATATCAATTCACCAGGATGGACTCTAGGCTGGTCGTGGGCCAAGAAAGAAGTAATATGGTCAATGGTGGGAGCTCAGACAACGGAACAAGGAGATTGTTCCAAGTTCAAAGGAAATGTCCCTCACTGTTGCAAGAAAAGCCCAGTAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAACAATTCTCCAATTGCTGCAAGGGTGGAGTATTGGCATCCTGGGGACAGGATCCAGCAGGTTCGGTCTCCGCCTTTCAGGTGAGTGTTGGGCTAGCCGGCACTTCAAACAAAACTGTAAAATTGCCAAAGAACTTCACTTTGCTCGGTCCAGGACCAGGATACACATGTGGACCTGCAAAGGTTGTGCCTTCTACAGTCTTCCTTACTCCTGATCGCCGGCGGAAAACTCAAGCACTGATGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCCTCCAAGAACCCAACTTGCTGTGTATCACTCTCAACTTTCTACAATGATACAATCACTTCTTGCCCAACGTGTGCGTGTGGCTGCCAGAACAAACATAATTGTATAAAGAGTGACTCAAAGCTACTGCACAAGGATGGAATAAACACTCCTAAAAAGGATAATACACCTTTACTACAATGCACCCATCACATGTGTCCTGTTAGAGTACACTGGCACGTAAAGATTAATTACAAGGATTACTGGCGCGTGAAGGTTGCTGTAACTAACTTCAACTATAGGATGAACTATACGTTGTGGACACTGGCAGTGCAGCATCCAAATCTGAACAATGTAACTCAAGTCTTCAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAATGATACTGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAATGTACAATCTGAAGTACTCATGAAGAAGGACAAGGATACCTTTACCTTCAAGCAGGGTTGGGCATTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCGCCAGAATCATACCCATTTCTACCCAACTCTGCGCCTGGAGGCTCCGGTGCAGTTACCAAATTAACCACCTCCTTGCTTTTGATACTCTGGTTTTTGTGGTGA 1371 43.91 MEVNTYNDPLHKILFKWECYSPRQQKIALLALLIFTAFYSTGAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKSPVVVDLLPGVPYNQQFSNCCKGGVLASWGQDPAGSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALMTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCACGCQNKHNCIKSDSKLLHKDGINTPKKDNTPLLQCTHHMCPVRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSAPGGSGAVTKLTTSLLLILWFLW 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28258485 28260867 + CaPI482276_06g016870.1 Cam06g1687 129987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1687 456 PIRSF COBRA 15 456 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cam06g1687 456 PANTHER PROTEIN COBRA 31 448 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cam06g1687 456 Pfam COBRA-like protein 67 230 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1636 Cam-Chr5:23573549 Cam06g1687 Cam-Chr6:28258485 1.60E-34 dispersed
Cam06g1687 Cam-Chr6:28258485 Cam07g1617 Cam-Chr7:30777300 1.20E-222 dispersed
Cam06g1687 Cam-Chr6:28258485 Cam06g1688 Cam-Chr6:28261538 1.90E-188 tandem
Cam04g1196 Cam-Chr4:26038357 Cam06g1687 Cam-Chr6:28258485 1.80E-158 wgd
Cam05g1111 Cam-Chr5:10232661 Cam06g1687 Cam-Chr6:28258485 2.40E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1687 - - - 0.0