Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam06g1707 | ATGGACGAAATTGCCCTCATCGTCGCCACCGTAGTAACCTTGGCCTCCGCCATCCTCCTCTACCGTGCTTTCTTCCTCCGCCGCAGATTCCGCCTCCCGCCTGGTCCAAAACCATGGCCGATCGTAGGAAACATGCCGCAAATCGGCGGAGCGCCTCTCCATTCCCTCCTCGCCACTATGGCCGGCGAGTACGGACCTCTGATGTACCTCCGATTAGGCTCCGTTGACATGGTCGTGGCGGCGTCGGCGGCAGTAGCGGAGCAACTCTTGAAGATACACGATACTAATTTCCTTAGCCGCCCGCCGAACGCCGGCGCAAAATACATTGCTTATAATTATCAGGATATGGTTTTTGCCCCGTACGGTCCACGGTGGCGATTACTCCGGAAAATCAGCGCCGTCCATCTCTTCTCCTCAAAAGCCCTAGATGATCATCGCCGCATACGCGAGGAGGAGATAGCGATGCTAGTACAGGCTCTTGCAAGGTCCGGCGAAGCTCCGGCGACCTTGGGGAGCTTGCTCACCGTGTGCACTGCGAATGCGCTCGGACGGACAATGATCGGCCGACGGGTTTTCGGCGATGGCAGCGGCGGCAACGATCCAGAGGCGAACCGATTTAAGGAAATGGTCGAGCAAGTGATGGTGCTGGCCGGAAAGTTCAACCCCGGCGACTTTTTCCCGTCGCTTGAGTGGCTTGATTTGTTGGGTGTGGCAAGTGAGATGAAGAAGGTCCACAAATGGTTCGACGATTTTTTGACCAAGATCTTGGAGGAGCACCGGAATTTATTGGCCGCAGGCCGTGGCGGCGGCGGCGACCACCACCAAGACTTGTTGAGTACTCTTCTGTCGTCAAAGGATGAAGCTGAGGATGAGAATGAGAAACTTAATGACACTGAGATCAAGGCTTTGTTGTTGAATATGTTTACCGCTGGAACCGACACTTCAGCAAGCACAGTGGAATGGGCCTTGACAGAGCTCATCAGACATCCCAAAATGATGGCCCAGGCCCAACAAGAATTGGACTCCGTAGTGGGCCGCGGTGGTGAAGGAAACATTCCGGCTCCACCCACCGACGCCGCTCTCCCTCCCCCGCATGGCCGCCGAGAGCTGCGAAATCACGGCTACCACATCCCTAAAGGCTCCACTCTCTTGGTGGATGTATGGGCCATTGGTCGTGACCCAAAAGAATGGGCCGACCCACTTGAATTCAGGCCCAATAGGTTCCTCCCAGGCGGAGAGAAGGCCCACGCCGATGTGAAGGGAAATGACTTTGAGGTGATTCCGTTTGGAGCTGGGCGGAGGATCTGCGTGGGTATGAGTATGGGCCTGAGGATGGTCCAGATGTTAACTGCCACGTTGGCCCATTCCTTTGATTGGGCCTTGCCTAATGGGCTTTGGCCAGATGAGTTAAACATGGACGAGGCCTATGGGCTGACTCTGCGTCGGGCCCAACCCTTGGTTGTGCATCCACGGCCCAGATTATTACCTGGGGTTTATCAAAAATTGCCTTAA | 1512 | 55.62 | MDEIALIVATVVTLASAILLYRAFFLRRRFRLPPGPKPWPIVGNMPQIGGAPLHSLLATMAGEYGPLMYLRLGSVDMVVAASAAVAEQLLKIHDTNFLSRPPNAGAKYIAYNYQDMVFAPYGPRWRLLRKISAVHLFSSKALDDHRRIREEEIAMLVQALARSGEAPATLGSLLTVCTANALGRTMIGRRVFGDGSGGNDPEANRFKEMVEQVMVLAGKFNPGDFFPSLEWLDLLGVASEMKKVHKWFDDFLTKILEEHRNLLAAGRGGGGDHHQDLLSTLLSSKDEAEDENEKLNDTEIKALLLNMFTAGTDTSASTVEWALTELIRHPKMMAQAQQELDSVVGRGGEGNIPAPPTDAALPPPHGRRELRNHGYHIPKGSTLLVDVWAIGRDPKEWADPLEFRPNRFLPGGEKAHADVKGNDFEVIPFGAGRRICVGMSMGLRMVQMLTATLAHSFDWALPNGLWPDELNMDEAYGLTLRRAQPLVVHPRPRLLPGVYQKLP | 503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 28425715 | 28430349 | - | CaPI482276_06g017070.1 | Cam06g1707 | 130007 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam06g1707 | 503 | Pfam | Cytochrome P450 | 373 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | Pfam | Cytochrome P450 | 33 | 347 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PANTHER | CYTOCHROME P450 98A9 | 7 | 347 | - | - | |
| Cam06g1707 | 503 | SUPERFAMILY | Cytochrome P450 | 25 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | Gene3D | Cytochrome P450 | 26 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | Coils | Coil | 278 | 301 | - | - | |
| Cam06g1707 | 503 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | E-class P450 group I signature | 386 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam06g1707 | 503 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1707 | 503 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g1707 | Cam-Chr6:28425715 | Cam07g1479 | Cam-Chr7:29432473 | 7.70E-98 | dispersed | |
| Cam06g1707 | Cam-Chr6:28425715 | Cam01g1962 | Cam-Chr1:32936424 | 4.10E-91 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam06g1707 | K05280 | - | csv:101207160 | 775.007 |