Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1735 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATCGTAGCACAGTTACAAAGCCACTTTCCTGATGCCTCATTCATGGTTTTCAACTTCAGAGAAGGTGGCAGGCGAAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTATTGCCATTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCACTGGAGGGTCAACAGAATGTGCTATTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTTTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCTGATTGGCCTCCATCGGATACACCTCTAGTTTTGGATTGTTTAATACTAAGAGTTTTACCTCTTTTTGATGGGGGAAAAGGATGTAGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCAGCACCGGCCAATAGAACTTCAAAGCTTTTATTTTCGACATCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTAGTTCTTGAATGCATCCATATGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTTGTTAGATCAAACATATTGATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCGAGGGAGCAGTATCCCAAGGACTTCAGAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAGTCTCACCACATCCTTCGATGATGAAGATGGAAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATCTTCAGTAGTGTAATTGATGGGCAGGAAGCAAAGGGGTCCAGTGATCCTCAAGTAGTCAATCATATAAACCGTAAAGAAGATTGGAAGGAGGACTTCGATCCTCCTGCATTCCAGGATTGTGACGATGGAAATCTTAAGCATGATAAGAAATCAGATTTTGATGCAGTGAAGGACATTACTGTGGATGATGTGAAGTACAAACTGGATGAAAATATATATTCTGATCTTAATGCAGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTTTTGGTTGCTGCTAATGTCCCGACTCATGCGAAAATCCAGGGGTTGGTGGATGATGCATACGAGAAATGTGAAGATATGGAAGAAAAGGATGATGGAAGAGATACTACACCTGAGAAATTGGAAAACAAGGTTCTGCAGAAAAAGTTGAGTGCTGATGGCTCTAGACAAAAATCAGAAAAATTGCAAACACCGATTCCCAAGAAACAGCCTATTTCAAGTGGAAAACCGACCGCTGATATGGGTTTAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTCTCTGCAAAACAAGCGAAGCCAAATGCAGTTTCTAGGTGGATCCCTCCTAACAAAGGCTCCTATATGAATTCTATGCATGTTTCCTATCCACCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCATCATCGAAGGATGTAAATGCAAATTCCAAAACGAAGGCTGCTGCCACTACTGATTCTCTGGTTGCTACAGATGTTTTTACTGAACGAAAAAACTATGAAGTGGATTCTGTGAGGCCTTCACACTCCGCCCCTGGGAACCTCATGCTTGGCCCATCATCTCCAGTTGAGTCAATTGAGGAGACATATTCTTCCTCTGAAACTTTAAAACCATCACATAGTGATGCACAACTTGGAGTACCACTTCCCCCCCTGCCCACAAAGCCTCCATCTCCATATTTACCATCACCCCGCCGGGCAAATGAAATACCTCCTCCACCTCCTCCACCACCCACTTCATTTCATCATATAGCTACAAGGTCCTCTGCTCTACCACTTTCCGTGTCTTTAGCACCACCACACATAGTTAACTCACCAAAGGCAGTGAATACCCCTGCCCCTCCCCCTCCCCCTCCATCTAGTAGGCAGAATAGTGTTTTGCCCCATTCTTCAACACAACCATCATGGGAGCAAATATATTCTTCCGTTTCTACTGGAACAGTGACTGATTCTATACCTCCTCCACCCCCACCTTCCTCTGTGGGCATGCCATCTACATTAAAGAATATTGTAAGTACTTCTCCTGTACCTGTCTTGTCACCTCTTTCAGCCCTTCTTGCCTCATCACATAAAGGGATATCACTACCCCCACCCCCACCCCCCCCTTCCCCTCCCCCTCCCCCTCCCCCTCCCCCACCTTCTATGAAACATGAAGCACTTGTTCCACCACCTCCTCCACCCCCGCCTCCACCGCCCCCACCCCCACCCCCATTAGTGCATGGGGCATTTCCTTCACCATCTCTAATGAAAACAGCACCACCCCCACCACCTCCGCCCCCACCCTTGCATAGTGCATCTCCAACACTATCTTTATTACATGGAGCCCCACCTCCACCATCTCCACCACCTTCAAAGCAGAGAGCATCACCTCCGCCACCTTCCATATATGGAGTCCCACCTCCACCACCTCCTCCCCCACCACCTTCCATGTACGGAGCCCCACCTCCGCCACCTCCTCCCCCCCCACCTGTCGTGTACGGAGCCCCACCTCCGCCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCGCCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCACCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCTCCTCCACCACCTGCCATGTACGGAGCCCCACCTCCACCACCTCCTCCTCCACCACCTGCCATGTACGGAGCCCCACCTCCACCACCTCCTCCCCCACCACCTTCCATGTATGGAGCCTCACCCCCACCACCTCCTCCCCCACCACCTTCCATGTATGGAGCCTCACCTCCACCACCTTCTATACATGGAGCCCCACCCCCACCTCCTCCCCCACCTTCGATGTTTGGTGCAACTCCTCCTTTAACCCCTACAATGCGGGGGGTACCCCCTCCTCCTCCACCCTCCTCGATGCGTGGGGCTCCTCCACCCCCTCCACCTCCACCAATGCATGAGGCTCCTCCACTGCCACCCTCCTTGCGTGGGGCTCCCCCACCACCGCCACCTCCATCTACGCATGGGGCTCCTCCTCCACCACCACCACCTCCACCAATGCATGGGGCTCCTCCTCCACCACCACCTCCTCCAATGCATGGGGCTCCACCACCACCACCTCCTCCGATACGTGGGGCTCTTCCCCCACCACCTCCCCCTCCAATGCATGGGGCTCCTCCACCACCGCCCCCTCCAATGCATGGAGCCCCTCCCCCACCACCACCACCCGGGGGTGGTAGAGCCCCTCCCCCGCCGCCCCCGCCCGGGGGTGGTAGAGCCCCTCCCCCGCCGCCCCCGCCCGGGGGTGGTAGAGCCCCTCCCCCGCCGCCCCCGCCCGGGGGTGGTAGAGCCCCTCCCCCGCCTCCCCCGCCTGGGGGTGGTGGAGCACCAGCACCACCTCCCCCTCCTGGTGGAGGTCGTGGAGCACCTGCCCCTCCTAGACCTCCTGGTGTTGGACCTCCTCCACCTCCACCACTAGGTGCTAAAGGAGCAAATGCTCCACCTGACCCGAGAGGTTTGTCTTCTGGGAGAGGGCGTGGGCTAACACGCTCTACAGCTACAGCACCTCGAAGGTCCTCCTTGAAACCTCTACATTGGAGCAAAGTAACGAGGGCTCTGCAAGGGAGCTTGTGGGAAGAACTACAAAGATACGGCGAGCCTCAAATTGCTCCAGAGTTTGATGTGTCTGAGTTAGAGACTCTCTTTTCTGCAACTGTCCCCAAACCTGCTGATAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAACTGACAAAGTTCACCTGATTGACCTCAGGAGAGCTAATAACACCGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTAGCAATGGATGAGTCAGTTTTAGATGTTGATCAGGTGGAAAATCTCATAAAATTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATATGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCAAAGATGAGAGTGTTTTCTTTTAAGATACAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGTTTAAATACTGTCAACTCTGCATGTGATGAGGTTAGGAATTCTACCAAATTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACATTGAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGCTTCAAGCTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACACTCATGCACTATCTTTGCAAGGTCCTCGCTTCAAAGACACCAGCTCTTCTAAATTTTCATTTGGACCTGGGGAGCCTCGAGCCAGCAACCAAGATACAATTGAAATCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAGGCAGGAGCTTGTTGCTTCTGAAAGTGATGGTCCAGTCTCTGAAGTTTTTCGCAAGACGCTGAAAGAATTTATTGCTATTGCTGAGACAGAGGTGACATCTGTGACAAATCTATACTCTACTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCGGCTCGTTGTCCATTTGAGCAGGTTACAGTGACACTATTGAACTTCGTGAGATTATTTCGGAAAGCCCACGAAGAAAACTGCAAACAGGCTGAATTGGAAAAGAAAAAGGCCGAGAAGGAAGCCGAAATGGAGAATGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG 5199 49.82 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSAPANRTSKLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHMDEDLVHEEMMFRVMFHTAFVRSNILMLNRDEVDVLWDAREQYPKDFRVEALFLDADAVVPSLTTSFDDEDGNETGAASPEEFFEVEEIFSSVIDGQEAKGSSDPQVVNHINRKEDWKEDFDPPAFQDCDDGNLKHDKKSDFDAVKDITVDDVKYKLDENIYSDLNAVKDIAVDDGDMNSNSFLVAANVPTHAKIQGLVDDAYEKCEDMEEKDDGRDTTPEKLENKVLQKKLSADGSRQKSEKLQTPIPKKQPISSGKPTADMGLAKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYMNSMHVSYPPSRYNSAPAALASIASSKDVNANSKTKAAATTDSLVATDVFTERKNYEVDSVRPSHSAPGNLMLGPSSPVESIEETYSSSETLKPSHSDAQLGVPLPPLPTKPPSPYLPSPRRANEIPPPPPPPPTSFHHIATRSSALPLSVSLAPPHIVNSPKAVNTPAPPPPPPSSRQNSVLPHSSTQPSWEQIYSSVSTGTVTDSIPPPPPPSSVGMPSTLKNIVSTSPVPVLSPLSALLASSHKGISLPPPPPPPSPPPPPPPPPPSMKHEALVPPPPPPPPPPPPPPPPLVHGAFPSPSLMKTAPPPPPPPPPLHSASPTLSLLHGAPPPPSPPPSKQRASPPPPSIYGVPPPPPPPPPPSMYGAPPPPPPPPPPVVYGAPPPPPPPPPPAVYGAPPPPPPPPPPAVYGAPPPPPPPPPPAVYGAPPPPPPPAMYGAPPPPPPPPPPAMYGAPPPPPPPPPPSMYGASPPPPPPPPPSMYGASPPPPSIHGAPPPPPPPPSMFGATPPLTPTMRGVPPPPPPSSMRGAPPPPPPPPMHEAPPLPPSLRGAPPPPPPPSTHGAPPPPPPPPPMHGAPPPPPPPPMHGAPPPPPPPIRGALPPPPPPPMHGAPPPPPPPMHGAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGGRGAPAPPRPPGVGPPPPPPLGAKGANAPPDPRGLSSGRGRGLTRSTATAPRRSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVSELETLFSATVPKPADKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDMDNLGKCEQYFLELMKVPRVESKMRVFSFKIQFGSQISEFKKSLNTVNSACDEVRNSTKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEPATKIQLKSLAEEMQAIIKGLEKVRQELVASESDGPVSEVFRKTLKEFIAIAETEVTSVTNLYSTVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKQAELEKKKAEKEAEMENAKGISLTKKSVK 1732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28639645 28660242 + CaPI482276_06g017350.1 Cam06g1735 130035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1735 1732 MobiDBLite consensus disorder prediction 522 536 - -
Cam06g1735 1732 Pfam Formin Homology 2 Domain 1327 1694 IPR015425 -
Cam06g1735 1732 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1322 1720 IPR015425 -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 635 809 - -
Cam06g1735 1732 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 662 678 - -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 552 566 - -
Cam06g1735 1732 CDD PTP_PTEN-like 16 190 - -
Cam06g1735 1732 Coils Coil 1695 1724 - -
Cam06g1735 1732 PANTHER FORMIN-J 1220 1719 IPR051144 -
Cam06g1735 1732 FunFam Formin-like protein 1322 1706 - -
Cam06g1735 1732 Coils Coil 1601 1621 - -
Cam06g1735 1732 SMART it6_source 725 1730 IPR015425 -
Cam06g1735 1732 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cam06g1735 1732 SMART PTEN_C2_2 198 338 IPR014020 -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 910 1302 - -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 827 1333 - -
Cam06g1735 1732 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 762 787 - -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 490 521 - -
Cam06g1735 1732 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1396 1721 - -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 747 761 - -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 490 580 - -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 1707 1722 - -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 1707 1732 - -
Cam06g1735 1732 Gene3D - 205 336 - -
Cam06g1735 1732 Gene3D Formin, FH2 domain 1319 1706 IPR042201 -
Cam06g1735 1732 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 687 719 - -
Cam06g1735 1732 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cam06g1735 1732 MobiDBLite consensus disorder prediction 831 903 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1798 Cam-Chr5:26764496 Cam06g1735 Cam-Chr6:28639645 2.90E-251 dispersed
Cam06g1735 Cam-Chr6:28639645 Cam07g0233 Cam-Chr7:3459027 8.30E-200 dispersed
Cam02g0859 Cam-Chr2:11321420 Cam06g1735 Cam-Chr6:28639645 9.10E-28 transposed
Cam05g1653 Cam-Chr5:24377382 Cam06g1735 Cam-Chr6:28639645 5.00E-25 transposed
Cam05g2691 Cam-Chr5:34305927 Cam06g1735 Cam-Chr6:28639645 6.50E-25 transposed
Cam04g1237 Cam-Chr4:26396716 Cam06g1735 Cam-Chr6:28639645 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1735 K28090 - csv:101215105 1313.13