Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1737 ATGGGAGGAGAATTTTCTAGGGCTCCAAACCCTCGAATTCCTTTCTCCTCCCTTCTCCTCCTCCTCCTCTCTCTCTGCCTCTCCGCCGCTCTCTCCGCCGCCCAAACCCCCTCATTCCGTTCCTTCTCCCCTCGCGACGCTTATTTGATCAACTGCGGCTCCCCGGCCCAAACCCGTCTTGACGACGGCCGGATTTTCAAATCCGATCGCGAATCCACTTCTCTCCTTTCCACCGAAGAAGACGTTCAGATTTCCGTCGATTCTATTCCCTCAAACGCCGCTGTTTCGCCTCTCTCTTCTTGGTCATTACCTCTATTTCGCTCCGCTAGAATTTTCCCCGACGATTCTACCTACACTTTCTTCATTTCTCAGCCCGGCCGCCATTGGATCCGCCTCTTCTTTTACCCTCTTCCTCACCCTAATTACAATCTCTCCGATTCCGTTTTCACCGTCACCACCGATACCTTCGTCCTCCTCCATGATTTCTCAATCAAACCCAATCCAAAAATCGTCTTCAAGGAATACCTAATCAACATTACCACCGATCGATTCTCCCTCCAGTTCAAACCTAAGAAGAATTCCTTCGCCTTCGTCAATGCCATTGAAATCGTCTCCGCTCCAGATCCTCTGTTTTCCGATTCCGCCAACTCTGTTTCTCCGGTGGGATTTTTCAACGGATTGTCGAACATTGCTCTGCAAATTTGCTACCGTGTTAATGTGGGTGGCCCTGAACTTGTTCCTAAAAACGATACGCTGTCAAGAACATGGGAAACGGATTATGCTTACAACAAATTTCCACAGGGTTCTAAAAATGTTTCTGTGGCTTTGAACTCCATTAGATACCCTGGAGATGAAGTGACTCCATTAATTGCTCCTAATTGGGTTTATGCAACTGCAGAGGATCTCCAAGATCCTGAAACGATTCAAGTAAATTTCAATATGAGTTGGAGTTTCAATGTGGAACCGAGTTACTCGTATTTGATCAGACTCCATTTCTGTGACATTGTGAGCAAAGTCCTCAACAGTTTGTACTTCAATGTCTACATCAATGGGATGATGGGTATTGCAGATCTTGATCTTTCTCAACTCACTGGTGATCTTTCCACTCCATACTATAGAGACCTTGTTCTCAATGCCTCTGACATCAAGAACAACACCATCATGATTCAGGTTGGTCCATCAAATTTGGATTCAGGGCTTCAAGATGCGATTCTGAATGGAGTGGAAATCATGAAGATGAGTAACGATGCACAAAGCTTGGATGGTTTGTTTTCAGTGGATGGGACATACATGGGAGGCTCAAGATTTAGCACAATGAAGATTGTAGCTGCTGTAGCACTTGGAATGGCAGCCATTGCCATTGTATTTGTTGGAATAATGTTCTTGAGATGGCAAAAAAGGCCTCAGGGATGGGAGAAGAGAAACAGTTTCTCTTCATGGCTTCTTCCTTTGAATTCAACTCACACTGCCAGTTTCTTCTCTTCAAAAAGCAGCTCCAGAAGATCATCAACCGTTTTTAGCTCTCGAAGGAGCAGGACTGGCCTCTCAGCCATTTACTCCAATGTCGGTCTTGGCCGTTTCTTCTCCCTCAACGAGTTACAGGCTGCTACCCAGAACTTCGAGGAGAAAGCAGTGATCGGCGTTGGTGGATTCGGCAAAGTCTACGTCGGAGCGTTAGAAGATGGAACCAAAGTCGCCATTAAACGTGGAAACCCTAGTTCTGATCAAGGCATTAACGAGTTCAGAACTGAGATCGAAATGCTGTCCAAACTCCGCCATCGCCATCTCGTTTCTCTAATCGGTTACTGCGACGAGCAATCCGAGATGATTCTGGTTTACGAGTACATGGCCAATGGCCCATTTCGCGACCACTTGTATGGCTCTAATCTCCCTCCTTTGTCTTGGAAACAGAGGCTCGAAATCTGTATCGGCGCTGCCCGTGGCCTTCACTATCTCCACACTGGTGCGGCTCAGGGCATAATCCACCGTGATGTCAAGACCACTAACATTCTTCTTGATGAAAATTTTGTTGCCAAAGTTGCTGATTTTGGGCTTTCCAAAGCTGCGCCATCTTTGGAACAGACCCATGTGAGCACTGCAGTCAAGGGAAGTTTTGGTTACCTTGATCCTGAGTACTTCAGAAGACAGCAACTCACTGAGAAATCTGATGTTTACTCATTTGGGGTTGTTCTTTTTGAGGTTCTATGTGCAAGACAAGTCATCAATCCCACATTGCCGCGTGAGCAGGTAAATTTGGCGGAGTGGGCAATGCAAAATTACAGAAAAGGAAAGCTAGAGAAGATAATTGATCCTCAAATTAGCAGCTCAATTGTAGAGGGGTCACTGAAGAAATTTGTGGAAGCAGCAGAGAAATGCTTGGCTGAATATGGGGTTGATAGACCAAGCATGGGAGATGTGCTATGGAACTTAGAATACGCTTTGCAGCTACAAGAGGCTGTATCAGAGCTCGAGGACCCTGAGGAAGACAAATGCGAAGGCCTTGTGGCTTTGGACAAACCAAATGACAATGAACCAAAAGGAGGTACAAGTGCTTCTGTAAGTGATGATATTTCTGAAGTTTCAGTTAGTGCTCCTTTGTTTTCAGAAGTTCAAAATTTTCAGGGAAGATAA 2631 45.8 MGGEFSRAPNPRIPFSSLLLLLLSLCLSAALSAAQTPSFRSFSPRDAYLINCGSPAQTRLDDGRIFKSDRESTSLLSTEEDVQISVDSIPSNAAVSPLSSWSLPLFRSARIFPDDSTYTFFISQPGRHWIRLFFYPLPHPNYNLSDSVFTVTTDTFVLLHDFSIKPNPKIVFKEYLINITTDRFSLQFKPKKNSFAFVNAIEIVSAPDPLFSDSANSVSPVGFFNGLSNIALQICYRVNVGGPELVPKNDTLSRTWETDYAYNKFPQGSKNVSVALNSIRYPGDEVTPLIAPNWVYATAEDLQDPETIQVNFNMSWSFNVEPSYSYLIRLHFCDIVSKVLNSLYFNVYINGMMGIADLDLSQLTGDLSTPYYRDLVLNASDIKNNTIMIQVGPSNLDSGLQDAILNGVEIMKMSNDAQSLDGLFSVDGTYMGGSRFSTMKIVAAVALGMAAIAIVFVGIMFLRWQKRPQGWEKRNSFSSWLLPLNSTHTASFFSSKSSSRRSSTVFSSRRSRTGLSAIYSNVGLGRFFSLNELQAATQNFEEKAVIGVGGFGKVYVGALEDGTKVAIKRGNPSSDQGINEFRTEIEMLSKLRHRHLVSLIGYCDEQSEMILVYEYMANGPFRDHLYGSNLPPLSWKQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVADFGLSKAAPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARQVINPTLPREQVNLAEWAMQNYRKGKLEKIIDPQISSSIVEGSLKKFVEAAEKCLAEYGVDRPSMGDVLWNLEYALQLQEAVSELEDPEEDKCEGLVALDKPNDNEPKGGTSASVSDDISEVSVSAPLFSEVQNFQGR 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28671624 28677703 - CaPI482276_06g017370.1 Cam06g1737 130037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1737 876 SMART serkin_6 540 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1737 876 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524(InterPro)
Cam06g1737 876 PANTHER OS07G0166700 PROTEIN 528 818 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cam06g1737 876 Pfam Protein tyrosine and serine/threonine kinase 543 802 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1737 876 ProSiteProfiles Protein kinase domain profile. 540 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1737 876 MobiDBLite consensus disorder prediction 836 857 - -
Cam06g1737 876 FunFam Receptor-like protein kinase FERONIA 231 415 - -
Cam06g1737 876 FunFam Receptor-like protein kinase FERONIA 616 830 - -
Cam06g1737 876 CDD STKc_IRAK 546 811 - -
Cam06g1737 876 Gene3D Phosphorylase Kinase; domain 1 502 615 - -
Cam06g1737 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1737 876 SUPERFAMILY Protein kinase-like (PK-like) 514 811 IPR011009 -
Cam06g1737 876 Gene3D - 230 416 - -
Cam06g1737 876 Gene3D - 46 207 - -
Cam06g1737 876 Gene3D Transferase(Phosphotransferase) domain 1 616 833 - -
Cam06g1737 876 Pfam Malectin-like domain 50 412 IPR024788 -
Cam06g1737 876 FunFam Putative receptor-like protein kinase 47 207 - -
Cam06g1737 876 FunFam receptor-like protein kinase FERONIA 502 615 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2577 Cam-Chr1:37411229 Cam06g1737 Cam-Chr6:28671624 9.70E-178 dispersed
Cam02g2129 Cam-Chr2:34044896 Cam06g1737 Cam-Chr6:28671624 4.00E-216 dispersed
Cam06g1289 Cam-Chr6:24334112 Cam06g1737 Cam-Chr6:28671624 1.50E-62 dispersed
Cam06g1737 Cam-Chr6:28671624 Cam09g0228 Cam-Chr9:2919266 3.10E-256 dispersed
Cam01g0796 Cam-Chr1:8913091 Cam06g1737 Cam-Chr6:28671624 9.30E-52 transposed
Cam03g0071 Cam-Chr3:1688803 Cam06g1737 Cam-Chr6:28671624 4.00E-58 transposed
Cam06g0073 Cam-Chr6:2591940 Cam06g1737 Cam-Chr6:28671624 5.00E-74 transposed
Cam06g1737 Cam-Chr6:28671624 Cam08g1331 Cam-Chr8:19612372 6.20E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85283 PF12819 Malectin_like 1.10E-35 CL0202 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1737 - - - 0.0