Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1764 ATGGACGCCACTTGGAGGCCGAAGTGTGAAGTAATGGCCTTTGAAGATTCTTTTCCTTTATCTTGTCAACTTTCTCCTCTCCCTTTTAGATCAAGCTACAACAATTATTCTGGATTGGATTGGAATTGCAACTTTGGGTTGCAAGATAACATTTTTGAAGTTGTTCCTTTGTTGGAGAGTTTCCCAAATAATGACTCGTTTTTGGAATCAAAGGATATAGTACCTATTAACACCTTTATATCAGAAAATGGGGTTGGGATTTGGAGTGAAATGGAAAATGGCATATTTGGCTTTGTTGAGGAAGAACCTGTTTTATTGCTAGAAGGAGAAGATGGTGGAGGAAATGAAGAAAATAGAGAAGTGATGAAGAAGGGGAAGAGAAAGTATTTGAGATCAGAAAATAGCAAAAACAATGGGAGTTATTCAACATCATCATCATCTTCAAAAATGTTGTCAAGAAAAGCAATATCTGAGTATTTCTACATGCCCATAACTCAGGCTGCTAAAGAGCTTAATGTGGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGAATAAGACGATGGCCTCATAGGAAGTTGATGAGCCTCCAAACCCTAATCAAGAATGTCAAGGAGATTGAAAAGGGAGAAGGAGAGAATAAGTTGAAGAATGTATTGGAAATATTAGAGAATGAGAAGAAGTTAATGGAGGAAAGGCCAGATTTGCAATTAGAGGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAGGCCAACTACAAGAAAAGAAAGCTCTCAGGAATCATCTTCAATAATAACAATAATATAATTAATGAAGATAATTCCCAGTGTTTCTCTTCCTCCACCACCATTCATGATCAGGATGAAGAAGATGATGAAGAAATGAAATATCTCTTGTCAGATTGCTCATTTTCCTCAACTAACTGCACCCTGTTCATGTAA 948 36.92 MDATWRPKCEVMAFEDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLESFPNNDSFLESKDIVPINTFISENGVGIWSEMENGIFGFVEEEPVLLLEGEDGGGNEENREVMKKGKRKYLRSENSKNNGSYSTSSSSSKMLSRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKEIEKGEGENKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGIIFNNNNNIINEDNSQCFSSSTTIHDQDEEDDEEMKYLLSDCSFSSTNCTLFM 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28830335 28831969 - CaPI482276_06g017640.1 Cam06g1764 130064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1764 315 MobiDBLite consensus disorder prediction 109 147 - -
Cam06g1764 315 Coils Coil 214 234 - -
Cam06g1764 315 PANTHER PROTEIN RKD4 133 276 IPR044607 GO:0003700(InterPro)
Cam06g1764 315 Pfam RWP-RK domain 151 198 IPR003035 -
Cam06g1764 315 ProSiteProfiles RWP-RK domain profile. 134 219 IPR003035 -
Cam06g1764 315 MobiDBLite consensus disorder prediction 112 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2146 Cam-Chr1:34248480 Cam06g1764 Cam-Chr6:28830335 6.10E-16 dispersed
Cam05g1067 Cam-Chr5:9757859 Cam06g1764 Cam-Chr6:28830335 2.30E-28 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52189 PF02042 RWP-RK 5.70E-21 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1764 - - - 0.0