Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1796 ATGGAAGTTTTTGGGTTTATGCCCAACAGATGGATTGCAACCGCCCTTGGAATTTGGATTCAATGTATCTGCGGTGCTTCCTACACCTTCAGCATCTATTCTTCCGCTCTCAAGTCCTCCCAGGCCTACGATCAATCCACCCTCGACATCGTTTCCGTTTTCAAAGACATCGGCGCCAACGCCGGCATCATTTCTGGTTTTCTTTACTCCGCCGTCACTCCCCCAGCCCCCCGCTGGGCCTTTGCCGGGCCATGGGTGGTTCACGCCGCCGGAGCGATTCAGTGCTTCCTCGGATATATATTCATATGGGCCGCTATCTCTGGAGTGATCGATCGGCCGCCGGTGCCGGCGATGTGCTTCTTCATGTTTCTGGCTGCACATGCGCAAACGTTTTTCAATACGGCGAATGTGGTAACTGGCGTGCACAATTTTGCGCACTATAGCGGGACGATTGTGGGAATCATGAAGGGATATCTTGGTCTCAGTGGAGCGCTGCTAATCCAAGTTTATAATACGACTTGCAATGGAGATCCAAGCAATTTTCTCCTCATGCTGGCGGTTTTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTGTTAGAATTGACAAAACAAAATCTAGTAATGAGATGAAGCATTTGAATTCATTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTAATGGTTGTCATCATCTTGAACAACACTTTCTCCCTTTCATCATGGACTCGTTTCTTTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGCAATCGCCATTAATGCTCAGAGGGAAGACTTTAGAGAGTCATCTCCATCATTCCTCACTGAAAAAAGTCATGTTGTTAACAAACTCAAGTCAATGGATGCAGAGGATTCTGTTGAATATCATGAGTTGCCCAGGGATGAGAGCCAGAGAGTGGCTGTTTCCAACTCTAGAATTCCTCAAGCCATGAATGTCTTGGAAGCTATACGCACTATAAACTTCTGGCTGTTGTTTCTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGCCAACTTGGCCAGTCTCTTGGTTACACAGCAACAGAGACGAAGACATTTGTTTCGTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTTCTTCTCCACTCATATGGGTGGGCAAGGCCATTGTTAATGGCAATTACTCTAATGATAATGAGTGGCGGCCACATCGTGATCGCCTCCGGTTTCTCTGGAAATCTGTATGTGGGTTCAATTCTTGTTGGCATATGCTATGGCTCACAATGGTCATTGATGCCTACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGTACTATTTTCAACACCATAGCCATCGCCAGCCCTTTGGGGTCTTACATTTTTTCTGTTCGAGTTATCGGTTACATTTACGACAGAGAAGCTGCCGGAGAACATGGCTCCTGCTCTGGTACACACTGTTTGTTGATATCTTTTCTTGTCATGGCCGTCGTGGCTTTCTTGGGATCTCTTGTTGTTGCTGCACTCTTCTTCCGAACCAGGAGATTTTACCGACTGGCGTTGCAAAGAAGAGTGGAATGTCTAAGTTAG 1632 46.02 MEVFGFMPNRWIATALGIWIQCICGASYTFSIYSSALKSSQAYDQSTLDIVSVFKDIGANAGIISGFLYSAVTPPAPRWAFAGPWVVHAAGAIQCFLGYIFIWAAISGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHYSGTIVGIMKGYLGLSGALLIQVYNTTCNGDPSNFLLMLAVLPTLLSIMFMWFVRIDKTKSSNEMKHLNSLSALAVIVAFYLMVVIILNNTFSLSSWTRFFTFSILLILLAAPLAIAINAQREDFRESSPSFLTEKSHVVNKLKSMDAEDSVEYHELPRDESQRVAVSNSRIPQAMNVLEAIRTINFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLMIMSGGHIVIASGFSGNLYVGSILVGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAGEHGSCSGTHCLLISFLVMAVVAFLGSLVVAALFFRTRRFYRLALQRRVECLS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29074493 29077308 + CaPI482276_06g017960.1 Cam06g1796 130096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1796 543 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
Cam06g1796 543 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 531 - GO:0016020(PANTHER)
Cam06g1796 543 CDD MFS_Mch1p_like 10 516 - -
Cam06g1796 543 Gene3D MFS general substrate transporter like domains 213 523 IPR036259 -
Cam06g1796 543 Pfam Nodulin-like 10 264 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1796 Cam-Chr6:29074493 Cam06g1798 Cam-Chr6:29086094 2.80E-162 dispersed
Cam06g1796 Cam-Chr6:29074493 Cam06g1797 Cam-Chr6:29080974 7.10E-190 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1796 - - - 0.0