Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1797 ATGGAAGCTCCTCCGATTCCGAGCAACAGATGGATGGCTACCGTTGCCAGCATTTGGATCCAGTGCATCTGCGGTCCATCCTACACCTTCAGCATCTACTCCGCCGCCCTCAAATCCACTCAAAACTACGATCAATCCACTCTCGACACCGTTTCCGTCGTCAAAGACATCGGCGCCACCGCCGGGGTTCTCTCCGGCCTCCTCTACTCCGCCGTCGTCTCCACAGACCACCCCCGTCGCCCATGGATCGTCCTCACCGTCGGAGCTATTCAATGTTTCCTTGGATACATTTTCATGTGGGCCGCCGTCTCCGGCTTAATCCCTCGACCGCCGGTGCCGACAATGTGTCTGTTCATGTTCTTAGCCGTCCATGCCCAAGTTTTCTTCAACACGGCTAATGTTGTCACTGGCGTTCATAATTTCCAGCTCTACAGCGGCACCATTGTCGGCATTCTAAAGGGATTTTTGGGTCTTAGTGCAGCAGTACTGATCCAATTCTCCAACGCATTCTTCAACGGAGACCCTGTAAATTATCTTTTGATGCTGGCGATTTTGCCGGCGGTTACGACTCTGTTGCTCATGAGATTCGTCGTAATCGACAATAAAACAGAGACCGGAAATGAATTGACCCATTTGAATTCCCTCTCGACAATTGCTCTAACAATCTGCGGATATCTCACGATTCTAATCATTTTAGACAACGTTCTCAATCTACCGACATGGGTTCGCATCTTCACCTTCATTCTCCTCCTCGCCTTTCTTGTTTCCCCTGTCGGAATCGCAATCAGAGCAAAAACAGAAGACTCTGTTTTCAAAACGAAGCTTCAAATTACCGAGAATCCCGTTGAATATCATCGCATTCCCAGCGAGGAGAAGATCAATGATGAGCTGGTGATTGTTAAAGACGGAGAAATGAATATAATCGAGGCATTTGGCACAATGAATTTCTGGCTATTGTTTTTCGCGATGATGTGCGGAATGGGTTCTGGGTTAGCCACCATAAACAACATGAACCAACTGTGCCAGTCCTTGGGATACAGAACAGTCGAAATCAATACATTCGTTTCACTTTGGAGCATTTGGAATTTCCTTGGGCGTTTGGGATCTGGCTATGCCTCTGATCTTCTCCTCTGGAAATTAGGGTGGGCGAGGCCATTGTTAATGGCCATTGCCTTGCTAACAATGAGCATCGGCCATATCGTCGTAGCTTTAGGATTTCGTGGGAATTTGTACTTGGGATCGGTGATTATCGGGATTTGTTACGGGTCTCAATGGTCGTTAATGCCGGCAATTACGTCGGAGATATTTGGAGTAAAGCATATGGGTACGATTTACAATACCATTGCTGTGGCTAGTCCGATTGGATCTTATGTTTTGTCTGTTAGAGTTATTGGGTATATTTACGACAGAGAAGCCTCCGCCGGAGATAACTCTTGCTCCGGTGGACACTGTTTTATGACGTCTTTTCTGATCATGGCGGCGGTGGCTTTCTTGGGGTTTGTGGTTGTTGTTGCTCTGTTTTTCCGGACCAGAAGATTCTATCAACTTCTTGTACAGAGAAGGCTCAAAGATTAG 1575 47.37 MEAPPIPSNRWMATVASIWIQCICGPSYTFSIYSAALKSTQNYDQSTLDTVSVVKDIGATAGVLSGLLYSAVVSTDHPRRPWIVLTVGAIQCFLGYIFMWAAVSGLIPRPPVPTMCLFMFLAVHAQVFFNTANVVTGVHNFQLYSGTIVGILKGFLGLSAAVLIQFSNAFFNGDPVNYLLMLAILPAVTTLLLMRFVVIDNKTETGNELTHLNSLSTIALTICGYLTILIILDNVLNLPTWVRIFTFILLLAFLVSPVGIAIRAKTEDSVFKTKLQITENPVEYHRIPSEEKINDELVIVKDGEMNIIEAFGTMNFWLLFFAMMCGMGSGLATINNMNQLCQSLGYRTVEINTFVSLWSIWNFLGRLGSGYASDLLLWKLGWARPLLMAIALLTMSIGHIVVALGFRGNLYLGSVIIGICYGSQWSLMPAITSEIFGVKHMGTIYNTIAVASPIGSYVLSVRVIGYIYDREASAGDNSCSGGHCFMTSFLIMAAVAFLGFVVVVALFFRTRRFYQLLVQRRLKD 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29080974 29082631 + CaPI482276_06g017970.1 Cam06g1797 130097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1797 524 Pfam Nodulin-like 10 261 IPR010658 -
Cam06g1797 524 CDD MFS_Mch1p_like 10 499 - -
Cam06g1797 524 SUPERFAMILY MFS general substrate transporter 221 512 IPR036259 -
Cam06g1797 524 Gene3D MFS general substrate transporter like domains 206 514 IPR036259 -
Cam06g1797 524 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 514 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1231 Cam-Chr2:24431361 Cam06g1797 Cam-Chr6:29080974 3.10E-84 dispersed
Cam06g1797 Cam-Chr6:29080974 Cam08g1228 Cam-Chr8:18654438 3.60E-82 dispersed
Cam06g1796 Cam-Chr6:29074493 Cam06g1797 Cam-Chr6:29080974 7.10E-190 tandem
Cam06g1797 Cam-Chr6:29080974 Cam06g1798 Cam-Chr6:29086094 7.10E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1797 - - - 0.0