Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1813 ATGGCGACGGTTCCTGACCGCTTCCGTCGCAACCCCATCGACAGACTTGTTGGGATTTCCGACGATTCGAAACAGAGTTGTAGTTCGACGACCCAGCTTCATGTTCTTGCTGTTGATGATAGCCTCGTCGATCGGAAGGTTATTGAGCGGTTGTTGAAGATCTCGTCGTGTAAAGTTACTGCTGTTGAGAGCGGGAGAAGTGCTCTTCAGTATCTGGGTTTGGATGGGGAAAACAATTCTGTTCAGTTTAGTAGTGGTTTGAAGGTGAATCTCATCATTACAGATTACTCCATGCCTGAAATGACTGGATATGAATTGCTCAAGAAGATCAAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTTTGGCTCGAATAGACAGTTGCTTGAAGGAAGGGGCTGAAGAATTCATAGTGAAGCCTGTGAAATTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGAAGGAAAGAAAATTGGGTCAAAGAGGAAGCTACATTTTGATCATGATCACGATCACCACCCGTCGTCTCCGGTTTCTCCGGCGTCATCCGCGGCAGTGTTCGACCCTTGCCACGGATTTCTGCAACGATCAGCACCGTCATTTCGACACGAAGACGAAGGCGAAGACGAAGAGCCAAAGCAGAGAGCTTCATCGGAGCTAAGGAAAATGACTCACTCGAAGCTTGAAGACGCCACTGGTTTGAAGGAAGACCTCATCGCAGACGCCTGGGCCGCCGCCATTAAAGCTCACAAACATTCGAAGCCATTTCTCGTTGATAAAACCCGAGATTTCTCCATCATCAGCTTCGCCGGATCTTGGTCGTCCGAAGCCTGGTTCTCTGCTTCTGATTCATCTTTCGGAGAAACAAAGATCGACACTCGGCTGTTTCCATCCGTCAGGAGCATCGGCGTCGACGATTATGCAGTCGTCAACTCTGCATTTTTCCAGAAATTTGAGGGAATTTTGGGGAAGCTTAAGGAGGTTCTGAGAGTGAATAAGCCTGTGGTGTTTACCGGCCACTCAGCCGGAGGTCCGATAGCCATTCTCGCAACCATCTGGCTGTTGGAACAGCAAAGAAACTCAGACTCAAACACCAACTCCACTCCTCCAAGATGCATCACATTTGGATCTCCCCTTGTTGGCAACTTCATTTTCTCCCATGCTCTCAAAAGGGAGAAATGGTCCACCCATTTCGTGCACTTCGTCATGAGATACGACATTGTTCCACGAATCCATCTTGCTCCTCTACCTTCCTTGCAACCACAATTGCAAACCATCCTCAACTCCCTGAACTCGAGATCACCAGGGTCGTCATCAAATGGAAATATAGCTACTGAATTCTTCATGACAGTGATGAGGAATGCATCGGCTGTGGTAAGCAACGCCGCCTGCCATCTTATGGGAAACACTAACCTTTTGCTAGACACTTTGAAAAGCTTTGTGAAATTGAGTCCTTACAGCCCTTTTGGCACTTACATTTTCTTTACTGAGAGCGAGAAAGTGGTGGTGGTGAGCAACCCGGATGCTATTTTACAAATACTATTCTACGCTTGTCAGTTGAGCTCTGAGAGCGAATCTGATCACATTGCTCAACAGAGTTTAAATGCCCATTGGGGTTATGAATCTAAAATGCAGAAATTGGAGCTCCTACATGCCATTCGTCTGGATGAATTGGATAAGCTTCCATTGTCCTTAACGAGCAGGAATACACCATTAACTGAAGCGTTGAATGAACTTGGCCTAAGTTCGAGAGCTTTATTGAATCTTCGGGCAGCGGGCACATTTGAAGAGCAGAAAATGAAAAATCAAGAAAGGATGGAAGCAAAGAAACAATATATCAAGGAACGATTGGATTGGCTAGAAGAAAATTATAGAGCTGTATGTAAGGTCGATGGTTTGGGATACTATGATGCATTTAAACTCCAGAAGGATCCGAAAGACTTCCAAGCTAATATCAAGAGGCTTGAGCAAGCAGGCATATGGGATGAGATCATAGAGATGCTCAAAAGATACGAGCTCCCAGAGGAATTCGAGGGCGATGACGAATGGATAAAACTTGGAACCAGGTTTCGCCGTCTCATTGAGCCTCTAGATATTGCTAACTACTATAGACACTCGAAGAATGATGATACTGGTCCTTATCTGGTAAAAGGAAGGCCAAAACGTTACAGATTTACACAAAGATGGCTCGAACATAATCAAAAGATGACAGAACCCAGTGAAGAATCAACTCTTTGGGCAAGGGTTGAGGAGCTTCGTATCCAAACCAAAACCAAAATGTACGCTGAATATTCAAGAGAAATTATAGAGCTGGAGAAGAAGATGAAGCGATGGGTCACTGAGATTGAAGATGACATGTTGTTAAAGAAATCTACCTTCATGGAGTGGTGGAAGACACTACCGGAACATCATAGATCACAGTCCTGTATTAGGGATGATATCGAGAGGATGGCAACTGACGATGATGCTATTAACACGATGTAG 2523 44.83 MATVPDRFRRNPIDRLVGISDDSKQSCSSTTQLHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGENNSVQFSSGLKVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENILARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGENEGKKIGSKRKLHFDHDHDHHPSSPVSPASSAAVFDPCHGFLQRSAPSFRHEDEGEDEEPKQRASSELRKMTHSKLEDATGLKEDLIADAWAAAIKAHKHSKPFLVDKTRDFSIISFAGSWSSEAWFSASDSSFGETKIDTRLFPSVRSIGVDDYAVVNSAFFQKFEGILGKLKEVLRVNKPVVFTGHSAGGPIAILATIWLLEQQRNSDSNTNSTPPRCITFGSPLVGNFIFSHALKREKWSTHFVHFVMRYDIVPRIHLAPLPSLQPQLQTILNSLNSRSPGSSSNGNIATEFFMTVMRNASAVVSNAACHLMGNTNLLLDTLKSFVKLSPYSPFGTYIFFTESEKVVVVSNPDAILQILFYACQLSSESESDHIAQQSLNAHWGYESKMQKLELLHAIRLDELDKLPLSLTSRNTPLTEALNELGLSSRALLNLRAAGTFEEQKMKNQERMEAKKQYIKERLDWLEENYRAVCKVDGLGYYDAFKLQKDPKDFQANIKRLEQAGIWDEIIEMLKRYELPEEFEGDDEWIKLGTRFRRLIEPLDIANYYRHSKNDDTGPYLVKGRPKRYRFTQRWLEHNQKMTEPSEESTLWARVEELRIQTKTKMYAEYSREIIELEKKMKRWVTEIEDDMLLKKSTFMEWWKTLPEHHRSQSCIRDDIERMATDDDAINTM 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29205961 29213538 - CaPI482276_06g018130.1 Cam06g1813 130113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1813 840 Pfam Response regulator receiver domain 35 154 IPR001789 GO:0000160(InterPro)
Cam06g1813 840 CDD Lipase_3 270 435 - -
Cam06g1813 840 PANTHER PROTEIN EDS1-RELATED 240 825 IPR044214 GO:0006952(InterPro)
Cam06g1813 840 Gene3D alpha/beta hydrolase 255 461 IPR029058 -
Cam06g1813 840 MobiDBLite consensus disorder prediction 213 239 - -
Cam06g1813 840 Coils Coil 616 636 - -
Cam06g1813 840 Pfam Enhanced disease susceptibility 1 protein EP domain 635 822 IPR041266 -
Cam06g1813 840 CDD REC_typeA_ARR 35 157 - -
Cam06g1813 840 SUPERFAMILY alpha/beta-Hydrolases 270 436 IPR029058 -
Cam06g1813 840 SUPERFAMILY CheY-like 32 157 IPR011006 -
Cam06g1813 840 Coils Coil 767 794 - -
Cam06g1813 840 Pfam Lipase (class 3) 280 425 IPR002921 GO:0006629(InterPro)
Cam06g1813 840 Gene3D - 32 200 - -
Cam06g1813 840 ProSiteProfiles Response regulatory domain profile. 34 162 IPR001789 GO:0000160(InterPro)
Cam06g1813 840 SMART REC_2 33 158 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1813 Cam-Chr6:29205961 Cam10g1583 Cam-Chr10:29562291 2.30E-38 dispersed
Cam04g0207 Cam-Chr4:7517157 Cam06g1813 Cam-Chr6:29205961 6.30E-46 transposed
Cam04g0440 Cam-Chr4:16531354 Cam06g1813 Cam-Chr6:29205961 1.20E-41 transposed
Cam05g2876 Cam-Chr5:35752053 Cam06g1813 Cam-Chr6:29205961 1.10E-41 transposed
Cam07g0526 Cam-Chr7:7670226 Cam06g1813 Cam-Chr6:29205961 2.50E-39 transposed
Cam08g1013 Cam-Chr8:16351858 Cam06g1813 Cam-Chr6:29205961 4.20E-35 transposed
Cam10g1223 Cam-Chr10:25603485 Cam06g1813 Cam-Chr6:29205961 7.70E-25 transposed
Cam05g2692 Cam-Chr5:34318970 Cam06g1813 Cam-Chr6:29205961 2.60E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52199 PF18117 EDS1_EP 3.70E-52 No_clan Cam TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1813 K18875 - csv:101214385 999.579