Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1823 ATGTTGGTCTTTTTAGTTCATTGCAATCTTCGCCAATACCATCGCATCGTCTTGTATCTGTATGTCTTCTGGCCTCCTATGTTGTCGCAGAAAAGAAACCCAGATGATGGAGATGGTCCGGCGGATGGTGATAATCCCGATGATAAGCGTAGAAAGTTTTGTTTATGGAGGTACTACTCCTACTACACGGTTAGAATTCGAAGTAGGAATTTGGTGCGATCTGGCTTCATTGGTTTGATTGAATTTTGGGAACTGCGGGTGAAAGTGCTAGATGATTCTTGTTTAAGGATTTTTTGGGTGGATTCTAGGGACTATTCTGAGGAGAGGAAAATGATCGTGGTTCGTGATGCCACATCATTGCAATCAATGCAACAACTATTGGAGCCAGTCATTCGTAAAGTGGTAAGGGAGGAGATTGAATCGGCACTAAGAAAGTACATTACCAATGTGCAAAGGAATGACGAGAATGATGGGAAAGAAATCTATTCTTCCGTGCCGAGATGCTTTCAATTGAAGTTCATAACTGATATTTCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGATGGTGGCTTTGGTTGACACCTTAACTGGGGAAGTTGTTGGCACTGGGACTCAATCCTCAGCCAAAGTGGAAATTGTAGTGCTCGAGGGTGATTTTGAGGGTGGAAGTGATAGTTACACTGCAGAGGAGTTCAAGAATAACATTGTAAGAGAGAGGGAAGGGAAGAAACCACTTCTTACAGGAGATACATGTGTGAGTCTCAAAGATGGCATTGGTTTGGTAGGTGAGATTTCTTTCACTGACAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTCGGTGCAAGAATTATAGACGACAATGATGGAACGAGAATACTGGAAGCAAAGACTGCGTCATTTGTGGTCAGAGATCACCGTGGAGAATTGTACAAAAAGCACCACCCTCCATTTCTGCAGGATGAAGTATGGAGATTGCAGAAAATTAGCAAGGATGGAGCCTATCATAAGCGCCTGAGCCAAGAAAAAATTGAGACAGTGAAAGATTTCCTTACTCTGCTTTATATACAACCTTCAAGGCTTCGTAATATTCTTGGCCCTGGCATGTCTACGAAAATGTGGGAAACTACAATTGAGCATGCACAGACATGTGTGCTCGATCGGAAGATTTACGTCTACAATCCTCGTGATTTGGAACAGAAAAGTGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATCACCAGTACGTTCCCATAGATAAGCTATCTGAAAGTGAAAAGGCTGATGCTCATAACTTGGTTATCTCTGCGTACAAACATTGGGAAGAAGTCAACTCCATTGATGATGAAACTTCTCTTGTGGGTGGCTCTTCTCACCCACTCAGTTTCCTTTACACCCCCAGCTCACCCATGGAGGACCATTATGGTAGCAAGTACTTGGCTTCTCCAAAATTTAGTGGCTTTGATTTCACACCATCAAATGTCTATTCGTCTGACATAATTTCATCGATGGGTTCTATTGGGAATCCTAGCAGCTTGGACGATCATGCTTTGCAGGGTTTTGATTCTATGGTTGTAAGATATGATCAGATACCAAGTTCCCCAAACTTTGCCAACTCTTCTCTGATCTGCGATTCCGAGCCACTAAACTCATCTTTCTTTGATGTGGATCATACGCAAGTTTTAGAGTCTGATTTGCAATGCAGCTCGATTTTAGAATCACGAGCAATTACAACAACTCTTCAAGGTGGCTCCTCATCATGTGGTGCTCAAATGAGATGGGCTAAATTATATGGTGTGCTAAAATGGTACATTTTGTTGAGGTTGGTAATTAGGAGAAACAAACGCGGGTTCGAGAGATACAAAGTTTTGTTCTTCCAAGTGTTTTGGTTATGCTATGTCTCTGAGCCAGAAGATTTTTTTCTCTCTGATTCAAGTGTTTGTACATTGGTGTAG 1995 42.46 MLVFLVHCNLRQYHRIVLYLYVFWPPMLSQKRNPDDGDGPADGDNPDDKRRKFCLWRYYSYYTVRIRSRNLVRSGFIGLIEFWELRVKVLDDSCLRIFWVDSRDYSEERKMIVVRDATSLQSMQQLLEPVIRKVVREEIESALRKYITNVQRNDENDGKEIYSSVPRCFQLKFITDISLPVFTGARIEGRDGSNLMVALVDTLTGEVVGTGTQSSAKVEIVVLEGDFEGGSDSYTAEEFKNNIVREREGKKPLLTGDTCVSLKDGIGLVGEISFTDNSSWTRSRRFRLGARIIDDNDGTRILEAKTASFVVRDHRGELYKKHHPPFLQDEVWRLQKISKDGAYHKRLSQEKIETVKDFLTLLYIQPSRLRNILGPGMSTKMWETTIEHAQTCVLDRKIYVYNPRDLEQKSGVVFNVVGQVMGLLSDHQYVPIDKLSESEKADAHNLVISAYKHWEEVNSIDDETSLVGGSSHPLSFLYTPSSPMEDHYGSKYLASPKFSGFDFTPSNVYSSDIISSMGSIGNPSSLDDHALQGFDSMVVRYDQIPSSPNFANSSLICDSEPLNSSFFDVDHTQVLESDLQCSSILESRAITTTLQGGSSSCGAQMRWAKLYGVLKWYILLRLVIRRNKRGFERYKVLFFQVFWLCYVSEPEDFFLSDSSVCTLV 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29277835 29283248 + CaPI482276_06g018230.1 Cam06g1823 130123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1823 664 Pfam Calmodulin binding protein-like N-terminal domain 169 314 IPR046831 -
Cam06g1823 664 Pfam Calmodulin binding protein central domain 327 392 IPR046830 -
Cam06g1823 664 PANTHER OS02G0177800 PROTEIN 113 621 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cam06g1823 664 Pfam Calmodulin binding protein C-terminal domain 397 459 IPR046829 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1772 Cam-Chr3:32808505 Cam06g1823 Cam-Chr6:29277835 8.70E-54 dispersed
Cam06g1461 Cam-Chr6:26040780 Cam06g1823 Cam-Chr6:29277835 1.00E-91 dispersed
Cam06g1823 Cam-Chr6:29277835 Cam02g1574 Cam-Chr2:28643129 7.40E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1823 - - - 0.0