Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1838 ATGGCTGCTCGTAGAGGAATCTGTTCTTTACTCTCTCGTTCTCTCTTATCTTCTTCCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTATGGGTTTAGTTCTTTTCTTCAATCTCATGGAAGAGTTTCAAGGTTCCAAAGAAGAGGGAATAGATTTAGCACATCTGCTTTGGCAGAGGAGGAACTCATCACTCCTCCTGTTCAGATCAATTACACTCAAAATCTGATTAATGGGCAGTTTGTAGATGCTGCATCAGGAAAAACGTTTCCGACTTACGATCCTCGCACTGGGGAAGTGATTGCTCATGTTGCCGAGGCTGATGCCGAGGATATTAACCGTGCGGTATCAGCAGCTCGAAAGGCATTTGACGAGGGGCCATGGCCGAGAATGACTGCTTATGAACGATCAAGGATATTACTGCGGTGTGCAGATTTGATTGAGAAACATATGTCTGAACTTGCAGCATTGGAAACATGGAACAATGGGAAACCTTACGAACAATCAGTTAAATCTGAATTACCGTTACTCGTGCGCTTGTTTCACTATTACGCTGGCTGGGCAGACAAAATCCATGGCTTAACAGTTCCAGCTGATGGAAATCATCATGTGCAAGTATTACATGAACCAATTGGAGTAGCAGGACAGATAATTCCATGGAACTTTCCTCTCATTATGTTTGCTTGGAAAGTTGGTCCTGCTTTAGCCTGTGGCAACACTGTTGTCCTAAAGACTGCAGAGCAAACACCTCTGACTGCTCTTTATGTCGCTAAGTTATTCCACGAGGCTGGTCTTCCTCCAGGGGTTCTAAATGTCGTTTCGGGCTATGGTCCGACGGCCGGTGCTGCGCTTGCTAGCCATATGGATGTGGACAAGTTAGCTTTCACCGGATCAACGAGCACAGGAAAAGTCGTACTTGAATTGGCAGCGAAAAGCAATTTGAAGCCAGTGACACTAGAGCTTGGAGGGAAATCACCTTTCATTGTTTGTGAGGATGCAGATGTTGATAAGGCTGTGGAGCTTGCTCATTTTGCTCTTTTTTTCAATCAGGGGCAATGTTGTTGTGCCGGATCTCGTACTTTTGTTCATGAGCGTGTATACGATGAATTTGTCGAAAAATCAAGGGTACGTGCCCAAAGACGTGTTGTTGGTGACCCTTTCAAGAAGGGTGTTGAACAAGGTCCTCAGATTGACTCGGAGCAATTCGAAAAAGTCCTAAGATACATCAAATCTGGCATTGAAAGTGATGCTACTTTGGAATGTGGTGGTGGTAGACTTGGGTCCAAGGGATACTTCATCGAGCCAACAGTTTTCTCAAATGTTAAGGATGATATGTTGATAGCGAAAGATGAAATCTTTGGTCCAGTACAATCCATCTTGAAATTCAAGGACATTGATGAAGTAATTCAAAGGGCAAACTCTACTCGTTACGGTCTAGCTTCGGGAGTTTTCACATCGAACATTGACACAGCCAACACGCTAACACGAGGATTGAGAACGGGAACCGTGTGGCTCAATTGCTTTGACATCTTCGACGCTGCAATACCTTTTGGTGGGTATAAAATGAGTGGAATAGGAAGGGAGAAGGGAATTTACAGCCTCCAAAGCTACTTGCAAGTAAAAGCTGTTGTTACACCTCTCAAGAATCCAGCATGGTTGTGA 1662 44.28 MAARRGICSLLSRSLLSSSSASSSSSSSSAYGFSSFLQSHGRVSRFQRRGNRFSTSALAEEELITPPVQINYTQNLINGQFVDAASGKTFPTYDPRTGEVIAHVAEADAEDINRAVSAARKAFDEGPWPRMTAYERSRILLRCADLIEKHMSELAALETWNNGKPYEQSVKSELPLLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTVVLKTAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKSRVRAQRRVVGDPFKKGVEQGPQIDSEQFEKVLRYIKSGIESDATLECGGGRLGSKGYFIEPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIQRANSTRYGLASGVFTSNIDTANTLTRGLRTGTVWLNCFDIFDAAIPFGGYKMSGIGREKGIYSLQSYLQVKAVVTPLKNPAWL 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29414919 29418099 + CaPI482276_06g018380.1 Cam06g1838 130138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1838 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 347 358 IPR016160 GO:0016491(InterPro)
Cam06g1838 553 FunFam Aldehyde dehydrogenase, putative 515 541 - -
Cam06g1838 553 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 319 326 IPR029510 GO:0016491(InterPro)
Cam06g1838 553 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 51 545 - GO:0004029(PANTHER)
Cam06g1838 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 325 514 IPR016163 GO:0016620(InterPro)
Cam06g1838 553 FunFam Mitochondrial aldehyde dehydrogenase 2 325 514 - -
Cam06g1838 553 Pfam Aldehyde dehydrogenase family 81 543 IPR015590 GO:0016491(InterPro)
Cam06g1838 553 SUPERFAMILY ALDH-like 69 547 IPR016161 GO:0016491(InterPro)
Cam06g1838 553 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 77 345 - -
Cam06g1838 553 CDD ALDH_F2BC 70 545 - -
Cam06g1838 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 87 543 IPR016162 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1724 Cam-Chr2:30338890 Cam06g1838 Cam-Chr6:29414919 1.10E-246 dispersed
Cam02g1941 Cam-Chr2:32500975 Cam06g1838 Cam-Chr6:29414919 3.30E-79 dispersed
Cam06g1135 Cam-Chr6:21464987 Cam06g1838 Cam-Chr6:29414919 2.90E-161 dispersed
Cam06g1817 Cam-Chr6:29227162 Cam06g1838 Cam-Chr6:29414919 1.40E-96 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1838 K00128 - csv:101209430 1006.13