Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1893 ATGGAGACTCTTCTTCATCATCTTCTTCCTCTTCAACTGTCACTTCATTCAATTTCCTTCACTATTTTCATCCTCATCCTCATCTTCCTTCTCCAAAAATGGCTTCTCTCCCCTTCACAAACTTCCCCTCCATCACCCCCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCTCATCTCACTCTCCTAAACTACGCCCGCCGCCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACCATCGTCGTTTCTTCCTCCGATCTCGCTCGTGATATCATGAAAACCCACGATCTCGTCTTCGCCAACCGACCCAAATCAACCATTGGCCACAAGCTTCTTTACAGCTCCAGAGACATAGCCGCTTCTCCCTACGGCGAGTACTGGCGGCAGATGAAAAGCGTTTGCGTTCTTCATCTCTTGAGCAGCAAAAGAGTTCAATCCTTCCGTTCTATAAGGGAAGAAGAAGTCAAATTCATGATCGAGAAGATCCAACACAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTCTGGATTGACTAACAATGTGATTTGCAGAGTGGGTTTAGGGAGAAAATACGGAGAGGGAGAAGATGGGAAGAAGTTCATGGATCTTTTATTGGAATTTGGGCAGTTATTGGGGAGTTTTAGCATTAGAGATTTCATTCCTTGGTTGGGTTGGATTGATGGGATTAGTGGGCTGGATTCTAAAGCAAACAGAGTAGCTAAAGAGCTGGATGATTTCTTTAACAGAGTGATTGAAGATCATATCAATCTAGAAAACAGAGACCAGCATTTTGATGAGCATAAGGATTTGGTAGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTTCCCCTTCAGATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACAACTTACACAGTATTAGAATGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGGAGAAACTGAAGAATGAAATTAAAGAAATAAAAGGTGATCACAAAGGGTGCTATGTAAACGAGGATGATTTAGACAAAATGGTATATTTAAAGGCAATAATCAAAGAGACATTGCGACTACACCCACCCATCCCACTTCTCGTTCCGAGAGAATCAACCCAACACATAAAGTTAAGAGGGTATGACGTTAAACGTGGGACTCGAGTTATGATCAATGCATGGGCAATCGGAAGAGACCCAAAATTATGGGAAGAAGCAGAGGAGTTTCGACCAGAAAGGTTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTTGAGTTGATCCCATTTGGTGCAGGGAGAAGAGGATGTCCTGGAATTGTATTTGCAACTATGATTAATGAGATAGCTTTAGCAAATTTGGTGCATATGTTTGAGTGGATATTGCCAAATGGTGAGGATTTGGACATGACAGGAACCTTTGGTTTAACCATTCATAGAAAGTTTCCACTTGTGGCTACCGCAGTTGAATGA 1515 42.84 METLLHHLLPLQLSLHSISFTIFILILIFLLQKWLLSPSQTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARRHGPLFLLRLGSVPTIVVSSSDLARDIMKTHDLVFANRPKSTIGHKLLYSSRDIAASPYGEYWRQMKSVCVLHLLSSKRVQSFRSIREEEVKFMIEKIQHNPVSVNLTEIFSGLTNNVICRVGLGRKYGEGEDGKKFMDLLLEFGQLLGSFSIRDFIPWLGWIDGISGLDSKANRVAKELDDFFNRVIEDHINLENRDQHFDEHKDLVDVLLWIQRENSIGFPLQMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMEKLKNEIKEIKGDHKGCYVNEDDLDKMVYLKAIIKETLRLHPPIPLLVPRESTQHIKLRGYDVKRGTRVMINAWAIGRDPKLWEEAEEFRPERFMNNSIDFKGQDFELIPFGAGRRGCPGIVFATMINEIALANLVHMFEWILPNGEDLDMTGTFGLTIHRKFPLVATAVE 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29951706 29953804 + CaPI482276_06g018930.1 Cam06g1893 130193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1893 504 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PANTHER CYTOCHROME P450 71B11-RELATED 21 500 IPR050193 -
Cam06g1893 504 CDD CYP71-like 72 498 - -
Cam06g1893 504 Gene3D Cytochrome P450 37 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 FunFam Cytochrome P450 83B1 30 501 - -
Cam06g1893 504 Pfam Cytochrome P450 43 490 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 SUPERFAMILY Cytochrome P450 43 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g1893 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0318 Cam-Chr3:4392715 Cam06g1893 Cam-Chr6:29951706 6.50E-124 dispersed
Cam03g0319 Cam-Chr3:4403375 Cam06g1893 Cam-Chr6:29951706 7.00E-126 dispersed
Cam03g0324 Cam-Chr3:4436450 Cam06g1893 Cam-Chr6:29951706 9.10E-114 dispersed
Cam05g2798 Cam-Chr5:35134384 Cam06g1893 Cam-Chr6:29951706 4.50E-106 dispersed
Cam05g2799 Cam-Chr5:35137045 Cam06g1893 Cam-Chr6:29951706 6.70E-113 dispersed
Cam06g1893 Cam-Chr6:29951706 Cam11g0022 Cam-Chr11:1810174 2.30E-102 dispersed
Cam07g1366 Cam-Chr7:28051982 Cam06g1893 Cam-Chr6:29951706 2.10E-15 transposed
Cam05g2791 Cam-Chr5:35072522 Cam06g1893 Cam-Chr6:29951706 4.90E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1893 - - - 0.0