Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam06g1912 | ATGGGGAAGAAGACGAAGAAACCCGGAAAGGGAAAAGAGAAGACTGAGAAGAAAACGGCCAAAGCCGAGGAAAAGAGAGCTCGCAGGGAGAGCAAGAAGCTCTCTCCTGAGGATGATATTGATGCAATTCTCTTGAGTATACAAAAGGAGGAAGCGAAGAAAAAGGAAGTTCATGTTGAGGAGAATGTCCCTGCGCCATCTCCTCGGTCCAATTGTTCGTTGACTATCAATCCCTTGAAAGAAACAGAGTTGATCCTTTATGGGGGTGAATTTTACAATGGTACCAAGACATATGTCTATGGTGATCTGTATCGATACGATGTTGAGAAACTAGAGTGGAAAGTAATTTCAAGTCCCAATAGCCCCCCTCCTCGTAGTGCTCATCAAGCTGTTGCTTGGAAGAATTACCTCTATATTTTTGGTGGAGAGTTTACATCTCCTAACCAAGAGAGGTTTCATCACTACAAGGATTTCTGGGTGCTGGACCTGAAAACAAATCAATGGGAACAAATAAATTTGAAAGGTTGTCCTAGTCCACGCTCTGGTCATCGGATGGTCTTGTACAAGCACAAAATTATTGTTTTTGGTGGGTTCTATGACACTTTAAGGGAAGTGAGATACTATAACGACATGTACGTGTTTGATCTGGATCAGTACAAGTGGCAAGAAGTAAAGCCTAGTCCTGGTGCAATGTGGCCTAGTCCTCGAAGTGGTTTCCAATTTTTTGTTCAGCAAGATGAGGTTTTCTTGTATGGTGGCTATTTTAAAGAAATTCAATCTGATAAGAACACTTCTGAAAGAGGAGTTGTGCATGCAGACATGTGGTCCCTTGATCCGAGGACTTGGCAATGGAATAAGGTAAAGAAAGGTGGGATGCCGCCTGGGCCTCGTGCAGGGTTCTCCATGTGTGTTCATAAGAGGCGAGCCTTGCTATTTGGGGGAGTGGTGGACATGGAAGTTGAAGGCAAGTATCCTCTAGAGTTAAGGAAGGAGAAGTCGACAAAGGCAAAGATTAAAAAAATTTCTGAGCAAAAGAACAATGAGGTTGCGTTTGATGATAATATAAATGAGGAGGTTGTTGACATTGGTAAAATTGAAAATCCAGTCATGGAAGAAGCATGCAACATGGAAACTGACATTGATGAAATATCTCATCATATATCTTCATCTGTGTCCATTAACAACGGTGGATTGGAAATGAGTTCTGGCAACAAACAACAAGAATCTGGTTCGAACAAAAATGCTGTTTTGCCAGAGGTGATTAAGCCCTGTGGACGTATTAACTCCTGCATGGTTGTTGGAAGAGATACACTGTACATCTATGGGGGTATGATGGAGATTAAAGATCGAGAAATCACCCTTGATGACTTGTATGCTCTCAATCTCAGTAAACTTGATGAATGGAAGTGCATTATACCGGCCACGGAATCTGAATGGGTAGAAGCCTCGGAGGATGAAGATGAGGAAGATGATGAAGATGACAGTGAGAATGATGACAATTCTGAAGGAAGCAATGGAAGTGATGAGGATGATAGTGATGAGGAGGATTTTGAGGCTGGAAATGATGGATCACGAAAAGTAGGAGATGCTGTAGCTTTAATTAAGGGTGAGGGCAGGAATCTCCGTAGGAAAGAGAAGCGGGCGAGGATCGAACAAATCAGAGCTAACCTTGGGCTTTCAGATTCACAAAGAACTCCCATGCCTGGAGAATCTCTAAGGGAGTTCTATAAACGTACAAATCTATATTGGCAAATGGCGGCACATGAGCATACACAACATACTGGAAAGGAACTTCGCAAGGACGGATTCGATCTTGCTGAATCTCGTTACAGGGAGCTTAAACCTATCCTTGATGAGCTTGCCATATTGGAGGCAGAGCAGAAAGCAGAAGAAGCAGAAGCTCCTGAAACTAGTTCAAGAAAAAGAGGCAAGAAGAAAAATAAAATTCGAATCTCCAAAACCCCAATCGGGTCACAGCGGCTCGTAGCCGGGTCCCGCAACTCGCAAATTACCAGAGCAATGAAGAAGAAAGCAACAGCAGGAACCATAATTCTTCTTTCACTTTTACTTTCTCTACAAGATGTTGTTCATCTTGCTTTCGCTCTATCTCCTTTAGACAGCAATCAGGACGTGGAGCAATCTGCAACTTCAAGACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGGCAGCCTGGAATATCATTGAGGAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTAGCTACGGGAAGTGCTTGGCTGATTTATGTGGGGCATTACATTGTGACCTAAAGATGGATATCAAGTCACGTAAATCTAAATGCAATCCTGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGAGTCTTGCCGATAGCTGTTTTCCAATTAATGAGGGACCATCAGCAAACCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGGGAAACAAAAGCCATTTTCTAGAGGAGCGGCGAGGCAACCCGGCATCTTCTACATGGCATCTTCAATACTGATTTTGATGCTGCTGCCAATTTTCTATGTCATTGTCTACTTACACCGCAGAGAATCGAGGAACGGAATCGAAGTGCTTAGACGAATCTCAAAAGCTGGACGTAAATCCAAACCCTTGATTGCATGGCTTTTCATCCACGGTTGTCTCATCGAGCTTGCTGGTTTAGTCATACTTTGCCGCAACTCCCATGAAGAGCAATCCTTTCTATGGATTAATCGGCAAGATTCTCATTGCCAGATGCATGATTAG | 2991 | 42.73 | MGKKTKKPGKGKEKTEKKTAKAEEKRARRESKKLSPEDDIDAILLSIQKEEAKKKEVHVEENVPAPSPRSNCSLTINPLKETELILYGGEFYNGTKTYVYGDLYRYDVEKLEWKVISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWVLDLKTNQWEQINLKGCPSPRSGHRMVLYKHKIIVFGGFYDTLREVRYYNDMYVFDLDQYKWQEVKPSPGAMWPSPRSGFQFFVQQDEVFLYGGYFKEIQSDKNTSERGVVHADMWSLDPRTWQWNKVKKGGMPPGPRAGFSMCVHKRRALLFGGVVDMEVEGKYPLELRKEKSTKAKIKKISEQKNNEVAFDDNINEEVVDIGKIENPVMEEACNMETDIDEISHHISSSVSINNGGLEMSSGNKQQESGSNKNAVLPEVIKPCGRINSCMVVGRDTLYIYGGMMEIKDREITLDDLYALNLSKLDEWKCIIPATESEWVEASEDEDEEDDEDDSENDDNSEGSNGSDEDDSDEEDFEAGNDGSRKVGDAVALIKGEGRNLRRKEKRARIEQIRANLGLSDSQRTPMPGESLREFYKRTNLYWQMAAHEHTQHTGKELRKDGFDLAESRYRELKPILDELAILEAEQKAEEAEAPETSSRKRGKKKNKIRISKTPIGSQRLVAGSRNSQITRAMKKKATAGTIILLSLLLSLQDVVHLAFALSPLDSNQDVEQSATSRPLEQDKEHVDEVHCSRERSRAAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNVSYGKCLADLCGALHCDLKMDIKSRKSKCNPAAAARNKHLCESLADSCFPINEGPSANRLHELFLHQFCGAHSCTGKQKPFSRGAARQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKAGRKSKPLIAWLFIHGCLIELAGLVILCRNSHEEQSFLWINRQDSHCQMHD | 996 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 30051723 | 30068235 | - | CaPI482276_06g019120.1 | Cam06g1912 | 130212 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam06g1912 | 996 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 789 | 810 | IPR013087 | - | |
Cam06g1912 | 996 | Gene3D | - | 45 | 355 | IPR015915 | GO:0005515(InterPro) | |
Cam06g1912 | 996 | MobiDBLite | consensus disorder prediction | 479 | 518 | - | - | |
Cam06g1912 | 996 | Pfam | Kelch motif | 423 | 463 | - | - | |
Cam06g1912 | 996 | Pfam | Domain of unknown function (DUF4110) | 558 | 642 | IPR025183 | - | |
Cam06g1912 | 996 | MobiDBLite | consensus disorder prediction | 476 | 530 | - | - | |
Cam06g1912 | 996 | MobiDBLite | consensus disorder prediction | 12 | 37 | - | - | |
Cam06g1912 | 996 | Pfam | Galactose oxidase, central domain | 246 | 305 | - | - | |
Cam06g1912 | 996 | Pfam | Galactose oxidase, central domain | 134 | 188 | - | - | |
Cam06g1912 | 996 | Pfam | Galactose oxidase, central domain | 190 | 239 | - | - | |
Cam06g1912 | 996 | PANTHER | KELCH DOMAIN-CONTAINING PROTEIN | 1 | 642 | IPR052588 | - | |
Cam06g1912 | 996 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Cam06g1912 | 996 | SUPERFAMILY | Kelch motif | 82 | 470 | IPR015915 | GO:0005515(InterPro) | |
Cam06g1912 | 996 | Coils | Coil | 12 | 32 | - | - | |
Cam06g1912 | 996 | Pfam | Galactose oxidase, central domain | 68 | 122 | - | - | |
Cam06g1912 | 996 | MobiDBLite | consensus disorder prediction | 628 | 651 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g1456 | Cam-Chr5:17825131 | Cam06g1912 | Cam-Chr6:30051723 | 4.90E-88 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam06g1912 | - | - | - | 0.0 |