Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam06g1926 | ATGATCTACTTCTCCGTGTCCTTCTTCTTACTTCTCTCAAGTTCTTTATGGGCTTTCTTTCTTCTCTATCTTTGCATCTCTAAATTCTACTGCTTCTCTAGAAAGCGCTTTTACTATTCTCCACCTTCTTACCCCTTCTTCGGTTGCTTGATTTCCTTTTACAAAAACCGGCGCCGCCTTCTGGCATGGTACACCGACCTGCTGTCCGATTCGCCGACTCAGACCATTGTGGTGCACCGGCTCGGTTCGAGGCGGACCGTTGTGACGGCTAACCCAGCCAATGTGGAGCACATGCTCAAGACCAATTTCATTAATTACCCTAAAGGAAAGCCGTTTACTGATATACTCGGCGATCTACTCGGCTGTGGCATTTTTAACGTCGACGGCGATTTGTGGTCCAGCCAACGCAAGCTCGCCAGTCATGCATTTTCCGCTAAGTCTCTAAGAGAATTCGTCGTTAAGACGCTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCAGTAACGCTGCTCGAACTAACGCCGTCATTGATTTGCAAGATGTTTTGGGAAGACTCGCTTTTGACACCGTTTGTAAGGTGACGCTGGGAACGGATGAGCAATGCTTGGACATGTCGCGTCCAATTCCAGAAATAGTAAATGCATTCGACACGGCAACGGGGATCAGTGCAAAGCGAGCAATAGCGCCACTATTTCTCACATGGAAGGCCAAGCGCATGCTCAACGTTGGCTCCGAAAAGAAGCTCAAAGAAGCGGTTCAAATGGTCCACAAATGGGTCTCTAATATCATTCGCAATAAAAACAATAATACCCTCCATAACCATAACCAAACACACAACAATGATTTGTTATCCCGCCTCTTGTCGACCAACCACGACGAGGAAGTCGTTAGAGACATGATTATTAGCTTCATAATGGCCGGCCGTGACACCACCTCCGCCGCCATGACATGGCTCTTCTGGTTGCTCACAAAGCACCCAAAAGCCGAACAGGCCATAATCAACGAAGCTACTTCATTGTCCGACGATTCAAAAACCATGTCGTTGGGTTATGGTTACGAAGAATTGAAGGATATGAAGTATTTGAAAGCGTGTTTATGCGAGTCCATGCGGCTATACCCGCCAGTGGCTTGGGATTCGAAGCACGCGGCGGCAGCGGACATTCTCCCGGACGGAACTCCGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCGTACGGAATGGGGAGGATGGAGGAGGTATGGGGGAAAGACCGGCTTGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAAACGGTCAGCCCGTTCAAGTTCCCGGTCTTTCAAGCGGGTCCGAGGATGTGCTTGGGAATGGAAATGGCGTTCATTCAGATGAAATACGTGGTGGCCACGGTTTTGAAGCGGTTTGAATTTAGACCAGCGAGTGAAAATTCTCCGGTTTTTGTCCCATTGTTGACAGCGCATATGGCGGGTGGACTACGGGTTTATGTTAGGGAAAGGATAGAACAAAAGTCAACTATGTGGAGTTTTGATTTTATAGCATCGAGCAAGTGCAAGAAGACCGAGAGGACCGCACCTAGTCCGACGATATCTATCTCAAGCTCCCCGTCAAGGTCAGGAGGCACAGATAACCAGGCCTTGGGTTTGAAGATGCCCATCTTAGATCTAGTGATCATGGGGGAAGAAACAGAAGGTGAGGTCGGAGTAGAGAAGGCAAGATTATCAGTAGGAATAATGGGAGAAAGACGCGAGGCAGATGATAGAATCTCAATGGAGGCAGAGAAAGAGGTTCTTCCTACCACTGAAGCGGGTCTTAAACCACTTCACATTCTCAAATCTACAGACCCACCTCTCTGGCTTGCTCCAAGCCCTTCCCTATCTAAAGTTGCTCGCCTTGCCTCACAGAATTTATTTTCTATGCTGAAACCATTCAGTCCTAAATCTCCATTTGATCATCTCCTGGTTGATGGATTTGATGCCGAGCAGATATGGCAACAAATTGACCTCCAATCACAACCTCTTTTGGCAAGTGTTCACCGGGATTTGAAGCGGTTTGAGAAGAATCCAGAAGCAATTTCGAACCTGAAGGTTTCTTTGGAGGATAAGAAGGTTATTCAAGAGATGGCTATAGGGTTGGAGGAAGAAAGTGATGATTTTGAAGAAGACATAAAGGAGTTTGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGAGGAGGACGAGGAGGAAGAAGAGGACTATGATGACGAAGAAGATGGAGACCCTGAGGAAGAGAGTGAAGATGAAGTTGAGGGTGAAGAAGGTAATGGTGGGATTGAGGATGGATTTTTAAAGATAAAGGAGCTAGAGGAGTTCATGGAGGAGGATGAGGTAAGGGAATATGGTTTACAGAAGAAGAAAGACGGTAAGAAGGAAAAGAAACAGAGGAAGGTAGAAGAAGAGTCTGAGGACGATGAAGATGATGAGCTTGGGGAGTTTGACCTTCATGGCGAAGAGGATGAAGAGAGCAAACTGGAAAAGGCGAGATACGAAGACTTTTTTGGTGCTAAAAAGAAGAATCTTGGTAGAAGAAAATCTAAATTGACAACTGGATCAGGGTCTGAACTCTCAGATTCAGGTGATGAAGAGGAAGAGGAAGATAATGAAGCACATGCAGAACAGAAGTCACAAAATCTTTCAACTCATCAAAAACAACTTAAGAAGCTTCAAGCTGAAATAGAGATGATGGAGAAAGCAAATTTGGAGCCCAAAACGTGGACCATGCAGGGAGAGGTAACCGCGGCAAAAAGACCTAAGAATAGTGCTTTGGAAGTTGATCTAGATTTTGAGCACAATGTGAGACCACCACCGGTAATCACAGAAGAAGTTACAGCAACGTTGGAAGAGATGATCCAGAAAAGGATCCTTGAGGGGCGTTTTGACGAAGTTCAGAAAGCACCTAAACGGCCTACTAAAGCACCTAGAGAAATCAAAGACTTGGATGAGAATAAAAGCAAGAAAGGTCTTGGTGAAATATACGAGGAAGAGTATGTTGAAAAGACTAATTTGGCTACAGCCCCATCATCATTCACCGATGAAGCGAAGCAAGAGGCGAGCTTACTTTTCAAGAAACTTTGCTCCAAGTTGGATGCTCTCTCCCATTACCACTACGCCCCAAAACCTGTCATAGAGGATATGTCTATATCGGTGAATGTCCCTGCTCTAGCAATGGAAGAGGTTGCTCCTGTTGCTGTCTCGGATGCGGCAATGCTCGCTCCAGAGGAAGTTTTTGCTGGCAAAGGTGAAATCAAAGAAGCAGCAGAACTTACACAATCCGACAGGAAGAGGAGGAGGGCCAACAAGAAAAGGAAATATAAAGCTATGGTGGCCAAAAGAGACGCGAAGAAGGCAAAAAATACTGCAGTTCGAAATGCCAATGAAGCCCTTTCCATCATAGGGAGTTACTAG | 3462 | 45.96 | MIYFSVSFFLLLSSSLWAFFLLYLCISKFYCFSRKRFYYSPPSYPFFGCLISFYKNRRRLLAWYTDLLSDSPTQTIVVHRLGSRRTVVTANPANVEHMLKTNFINYPKGKPFTDILGDLLGCGIFNVDGDLWSSQRKLASHAFSAKSLREFVVKTLEDEVHLRLIPLLSNAARTNAVIDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPIPEIVNAFDTATGISAKRAIAPLFLTWKAKRMLNVGSEKKLKEAVQMVHKWVSNIIRNKNNNTLHNHNQTHNNDLLSRLLSTNHDEEVVRDMIISFIMAGRDTTSAAMTWLFWLLTKHPKAEQAIINEATSLSDDSKTMSLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTPVRKGDRVTYFPYGMGRMEEVWGKDRLEFKPDRWFQNGELKTVSPFKFPVFQAGPRMCLGMEMAFIQMKYVVATVLKRFEFRPASENSPVFVPLLTAHMAGGLRVYVRERIEQKSTMWSFDFIASSKCKKTERTAPSPTISISSSPSRSGGTDNQALGLKMPILDLVIMGEETEGEVGVEKARLSVGIMGERREADDRISMEAEKEVLPTTEAGLKPLHILKSTDPPLWLAPSPSLSKVARLASQNLFSMLKPFSPKSPFDHLLVDGFDAEQIWQQIDLQSQPLLASVHRDLKRFEKNPEAISNLKVSLEDKKVIQEMAIGLEEESDDFEEDIKEFDEEEEEEEEEENEEDEEEEEDYDDEEDGDPEEESEDEVEGEEGNGGIEDGFLKIKELEEFMEEDEVREYGLQKKKDGKKEKKQRKVEEESEDDEDDELGEFDLHGEEDEESKLEKARYEDFFGAKKKNLGRRKSKLTTGSGSELSDSGDEEEEEDNEAHAEQKSQNLSTHQKQLKKLQAEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIQKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSKKGLGEIYEEEYVEKTNLATAPSSFTDEAKQEASLLFKKLCSKLDALSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFAGKGEIKEAAELTQSDRKRRRANKKRKYKAMVAKRDAKKAKNTAVRNANEALSIIGSY | 1153 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 30215043 | 30228116 | - | CaPI482276_06g019260.1 | Cam06g1926 | 130226 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam06g1926 | 1153 | CDD | CYP86A | 74 | 497 | - | - | |
| Cam06g1926 | 1153 | Coils | Coil | 890 | 917 | - | - | |
| Cam06g1926 | 1153 | FunFam | Cytochrome P450 | 32 | 507 | - | - | |
| Cam06g1926 | 1153 | Pfam | Cytochrome P450 | 41 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 776 | 818 | - | - | |
| Cam06g1926 | 1153 | SUPERFAMILY | Cytochrome P450 | 30 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 835 | 857 | - | - | |
| Cam06g1926 | 1153 | PANTHER | CYTOCHROME P450 | 25 | 497 | - | - | |
| Cam06g1926 | 1153 | Gene3D | Cytochrome P450 | 21 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | Coils | Coil | 713 | 755 | - | - | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 527 | 549 | - | - | |
| Cam06g1926 | 1153 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | PRINTS | P450 superfamily signature | 452 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 715 | 906 | - | - | |
| Cam06g1926 | 1153 | Pfam | Mpp10 protein | 650 | 1130 | IPR012173 | GO:0005634(InterPro)|GO:0005732(InterPro)|GO:0006364(InterPro)|GO:0034457(InterPro) | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 715 | 774 | - | - | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 527 | 548 | - | - | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 819 | 834 | - | - | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 1108 | 1128 | - | - | |
| Cam06g1926 | 1153 | PRINTS | E-class P450 group IV signature | 299 | 325 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | PRINTS | E-class P450 group IV signature | 394 | 408 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | PRINTS | E-class P450 group IV signature | 452 | 470 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | PRINTS | E-class P450 group IV signature | 360 | 376 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | PRINTS | E-class P450 group IV signature | 411 | 429 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g1926 | 1153 | MobiDBLite | consensus disorder prediction | 1114 | 1128 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g1926 | Cam-Chr6:30215043 | Cam10g1614 | Cam-Chr10:29937769 | 1.60E-111 | dispersed | |
| Cam01g1291 | Cam-Chr1:23968927 | Cam06g1926 | Cam-Chr6:30215043 | 9.50E-117 | transposed | |
| Cam07g0071 | Cam-Chr7:1885723 | Cam06g1926 | Cam-Chr6:30215043 | 1.20E-119 | transposed | |
| Cam10g1877 | Cam-Chr10:32790805 | Cam06g1926 | Cam-Chr6:30215043 | 1.10E-112 | transposed | |
| Cam05g1494 | Cam-Chr5:18589961 | Cam06g1926 | Cam-Chr6:30215043 | 1.00E-161 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam06g1926 | K20665 | - | csv:101202989 | 870.922 |