Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1986 ATGAAAAGAATTGGAAAGGGACTAGCTGTTGAGGGTGCAGCAGCTCTCTTCCCACCCACCCCTTGCTCTTGTTTTCTTTCTCTCTGTGGCCTCTTGTCTCCTGAGTCCTGTGAGTTGAGATTTGCGACCCCAGAGGGTAGCAAAGGAAGGTCGGAAAAAGAGCGACAGGTTGAGTTGTTTGTAGTTGTGTACCCCTACGCATACACGCAAAACACTACCACTACCACTACCACTACCACTACACATCCAATTCGGGTAATGGATCCAGAAGCTCTCTCAGCCACTTTGTTCAAATGGGATCCTCGAGGAATGGTGGGGGGCGGCAGCGGCGCACCCCTCCCAGCGCCACTGCCCCCCTACTCGCTGCGGCCCAGGGAGTTGGGATTGGGAGGCCTCGAGGACTTGTTCCAGGCTTACGGAATCAGGTATTACACCGCTGCTAAAATTGCGGAACTTGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTAGAGGATATGATGAACAGCCTCTCTCACATTTTTCGTTGGGACCTTCTGGTGGGTGAGAGGTACGGTATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTCTAGATGACGAGACCGATTCCTCCAGGCGCCGTCACCTCTTGTCCAATGACAACACAACCAACGTCGTCCTCGATGCCCTCTCTCAGGAAGGGCTGTCGGAAGAACCGGTGCAGCAGGAGAAGGAGGCGGTTGGAAGTGGAGGAGGAGGAGGAGCGTGGGAGGCAGTTGCAGCCGCTGAGATCAGGAAGAAGCAGCGGAGGAAAAACGGATCAAAAAAGAAGCAGGTGATGGTGATGGAGGAGGATCACGATGAGAACGAGGGAGCTGGGGAGGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGAAAGAAGAACGGCCTCGACTATCTCTTTCACTTATATGAGCAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGCCCCACTAAGGTGACGAACCAGGTGTTTAGATATGCAAAGAAGGCGGGAGCAAGTTACATAAACAAGCCCAAAATGAGACACTACGTGCACTGCTATGCCCTGCACTGTCTAGACGAGGAAGCGTCGAACGCATTGAGGAGCGTTTTCAAAGAGAGGGGCGAAAATGTGGGAGCCTGGCGACAGGCATGTTATAAGCCTCTGGTAGCCATAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTATGTGCCTACCAAACTCCGTCAACTCTGCCATGCCGAGCGCAACGGTTCCACAGCCTCCACCTCAGCCGCCGCACCTCACTTGCCTTTTTAG 1419 53.7 MKRIGKGLAVEGAAALFPPTPCSCFLSLCGLLSPESCELRFATPEGSKGRSEKERQVELFVVVYPYAYTQNTTTTTTTTTTHPIRVMDPEALSATLFKWDPRGMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDETDSSRRRHLLSNDNTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVAAAEIRKKQRRKNGSKKKQVMVMEEDHDENEGAGEEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRSVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNGSTASTSAAAPHLPF 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30599082 30601669 - CaPI482276_06g019860.1 Cam06g1986 130286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1986 472 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 297 460 IPR035209 GO:0003677(InterPro)
Cam06g1986 472 PANTHER PROTEIN LEAFY 87 466 IPR002910 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam06g1986 472 Gene3D Protein LEAFY 298 466 IPR038276 -
Cam06g1986 472 MobiDBLite consensus disorder prediction 230 301 - -
Cam06g1986 472 MobiDBLite consensus disorder prediction 197 213 - -
Cam06g1986 472 MobiDBLite consensus disorder prediction 197 216 - -
Cam06g1986 472 Pfam Floricaula / Leafy protein SAM domain 129 205 IPR035079 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52217 PF17538 C_LFY_FLO 3.00E-107 CL0123 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1986 - - - 0.0