Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0047 ATGGCTTTCCACAATATCGAAGTAACCCATTTCTATACGGTTCTTCTATGGTTTATGGTCTACGCAATAACGCACTGCTTTGCTGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGCGGCGCTCCGGCGGTATTTCAATCCCCGAAATGCCCTCTTTGGAAGCTCTCCGACTACACATTTCAACCTCCCAACGCCCCTCATTGTCAAATTGCAATGCATCAGGGTCGTAGGAAGTATCAGGAGGATCGCACTCTTTGTGCTCTCGACGTTCGAATTCCCTTCCCAAGTAAAACAGGTCTTAAGGAGGTTCCTGTGGGAATTATAGCAGTTTTTGATGGTCATAATGGTGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTGGAGTATTTTGTCGTGCATACTTATTTTCTTCTTGATGCCACTTACTCTGGAATTTTCAAGAGATCCATTAAGACATCTTCAAATGAGAGGGAACATTGTACCCTCTTTAATCAACTTAGTTGGAGCGACAAAATTAGTAACCTTGATCTGGAACTTGGAAGGCTTAAATACTTACTTCCAGCAGATTTTGACGATGATTTCCATTTGGAAATTTTGAAAGAAGCACTGCTGAGAGCTATACAAGATATTGATAAAACATTTTCCAAGGAGGCACATAAAAATAATCTTGTTTCCGGTTCTACTGCTACTGTTATATTATTAGCAGATGCACAAATTTTGGTTGCGAACATTGGTGACTCAAAGGCTTTCTTGTGCTCTGAAAAATTTCAGTCACCTGCAGAGGCTAAAGCCACCTTTTTAAGGTTATACAAGCAAAAAAGATATAGCGGCGCTTCACGTGCAAGGGGCTATGGAAATTCTAGACCAGATTCATATGATGGGCTGATGCATTTTTATGTCAAAGAATTGACTAGAGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCATGTTGTTGATTGGGGTGGTGTACCGAGAGTAAATGGTCAGTTGGCTATAACCAGAGCAATTGGTGACGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAGGTGACTGATTGGCAACCTTTGTCTCCCAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAACTGAGCCCACAAGATGTTTGTGACTTGTTGTGGGAAATAAACAATGATGGTATATCAAGTTCCGAACATTCTCCTTCATGCTCATACTCACTGGCGGATTGCATTGTTAGCACTGCCTTTGAACGGGGAAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGACCTGCTAGTTCTTCTCGGAGATTTCAGGAGGGGAGCTTTGTTGCACAGAGAGACTCAAGTTTTCCCATATCTGGAATAGAAAATCTTATTAAAGAGCACTCAGGCAAGGGTGTCTCTTCCAGTGCTGTGCAGTTGGAGCATTCTCATCCAGTTATGTCCAAGTTCAACAGATTATTAGTTGAAGGAAAGCACAATAATCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTACATGTTGCGAACTCAAAATGAAGAAGAAGAATATTTATGTGATCTACCCCACGCTCTTCCAGAATCCCTTAATCAGCCATATGGTGGATCTGTCAATGTGTACACTGACCAAAGCTTGTGCTTTCATCTTGGAATGATTGGAGCCAATGGCCAGTGCTTTAATCCTGAAGGCTTTGCTAGTTTTATTGGATTGCTTGAATCAATTCCTTTTCACGATCCTGGTCCAGATTATCAACTATTTGAGCATTCACCACCTGTATTGAGGTATTTGTTGAAGAAAAGGTTTGGTCGTGGTTCCTATGGTGAAGTATGGCTGGCTTTTCACGGGAATTGCCAGGAAGCGTTTAGTGCAATAGGAGAGAATGCTAACGTTTCGTGCAACTCATCTTTTGGAGACACCAATGCCAGAAATTATAGCTGCTCTTCAAATAGTTCTCAAGGCTATGCTCTGGATGATAACTTGTTCATCATGAAGCGTGTTATGGTTGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTGAATGCTTCTACATGCCTTGGAGATGTGTTGTCGACGGGAACTTCAAACTTTGTCTTTGAAGAATCACCACGGGAACCTAAAGATTTATTGACAAATGATGAATCACTGGGTTACACAGTAGGGGAAACTAGGCATTTTAAAAATATTTCTCCGAATTGGTTTAGACCAAAGAGAGTTGTCTATGAAGAAGGTTTAAATCATATTGTGAGATATGTAGAATCTTTTGAATCTCGGTCTAATGAAATATGGCTTGTATTTCATTACGAAGGGACGTCCCTCTCGAAGCTCATATATTCTATTGAAAATGCTGATGAAGAAAAAGTTGAGCAAAAAAACCATGTTCAAATATTACGACCTTCTAAGTGGTGGCGTTGGTTGAAAACAACAGAAGCAGGACAAGAGGAGATGAAAAATTTGATACGTCAATTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCAAAGGGGAGATGAGAACTTCTCTACGAAAATGCGGATTATTGACTTTGGTAGTGCTATTGATGAATTCACAGTTAAGCATCTTTATGGATCTATGGGACCTTCTAGAGCGGAACAGACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCTAGTGCTACATTGAAGTATGATATGTGGAGCGTTGGTGTAGTGATGTTAGAATTGATCTTAGGATCACCCAATGTTTTTCAGGTAAGTGATTTAACCCGTGTTCTTTTGGACCAGCATCTTCAAGGCTGGAATGAAGGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGATATCCTCAAGAAGTTATCAAAAAAATGGTCATCAGGGAGGTTCGCCAGCATCCTGGAAATGCTCCGAAGAAGTTTTTGCCCACCAAATAAAGAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTGCGATTGGTCCGCAATCTACTACAATGGAATCCGGAGGACCGTTTAAATATAAGTTATTCTTCCACCAAAGGTTTTGTTGCTGACAATCAGAAGCTCAGTTGA 3276 40.9 MAFHNIEVTHFYTVLLWFMVYAITHCFAESSTCLMVYKEGGAPAVFQSPKCPLWKLSDYTFQPPNAPHCQIAMHQGRRKYQEDRTLCALDVRIPFPSKTGLKEVPVGIIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRSIKTSSNEREHCTLFNQLSWSDKISNLDLELGRLKYLLPADFDDDFHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATVILLADAQILVANIGDSKAFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSRPDSYDGLMHFYVKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAITRAIGDVSFKSYGVISAPEVTDWQPLSPNDSYLVASSDGIFEKLSPQDVCDLLWEINNDGISSSEHSPSCSYSLADCIVSTAFERGSMDNMAAIVVPLRPASSSRRFQEGSFVAQRDSSFPISGIENLIKEHSGKGVSSSAVQLEHSHPVMSKFNRLLVEGKHNNLGCFYLSENLDEYKDYMLRTQNEEEEYLCDLPHALPESLNQPYGGSVNVYTDQSLCFHLGMIGANGQCFNPEGFASFIGLLESIPFHDPGPDYQLFEHSPPVLRYLLKKRFGRGSYGEVWLAFHGNCQEAFSAIGENANVSCNSSFGDTNARNYSCSSNSSQGYALDDNLFIMKRVMVERGAGVYLSGLREKYFGEIFLNASTCLGDVLSTGTSNFVFEESPREPKDLLTNDESLGYTVGETRHFKNISPNWFRPKRVVYEEGLNHIVRYVESFESRSNEIWLVFHYEGTSLSKLIYSIENADEEKVEQKNHVQILRPSKWWRWLKTTEAGQEEMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSQRGDENFSTKMRIIDFGSAIDEFTVKHLYGSMGPSRAEQTYDYTPPEALLNSSWYQEMSSATLKYDMWSVGVVMLELILGSPNVFQVSDLTRVLLDQHLQGWNEGLKQLAYKLRSFMELCILIPGISSRSYQKNGHQGGSPASWKCSEEVFAHQIKSRDPLKLGFPNVWALRLVRNLLQWNPEDRLNISYSSTKGFVADNQKLS 1091
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1604516 1625600 - CaPI482276_07g000470.1 Cam07g0047 130340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0047 1091 Gene3D - 61 447 IPR036457 -
Cam07g0047 1091 SUPERFAMILY Protein kinase-like (PK-like) 770 1076 IPR011009 -
Cam07g0047 1091 Gene3D Transferase(Phosphotransferase) domain 1 816 1084 - -
Cam07g0047 1091 ProSiteProfiles Protein kinase domain profile. 612 1084 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0047 1091 SUPERFAMILY PP2C-like 65 441 IPR036457 -
Cam07g0047 1091 Pfam Protein kinase domain 772 1075 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0047 1091 SMART serkin_6 612 1084 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0047 1091 PANTHER PROTEIN PHOSPHATASE 69 439 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam07g0047 1091 Pfam Protein phosphatase 2C 303 433 IPR001932 -
Cam07g0047 1091 Pfam Protein phosphatase 2C 201 256 IPR001932 -
Cam07g0047 1091 CDD PP2Cc 75 440 IPR001932 -
Cam07g0047 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 861 873 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g0047 1091 SMART PP2C_4 62 438 IPR001932 -
Cam07g0047 1091 ProSiteProfiles PPM-type phosphatase domain profile. 68 440 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0047 Cam-Chr7:1604516 Cam08g1452 Cam-Chr8:20806036 3.40E-18 dispersed
Cam07g0047 Cam-Chr7:1604516 Cam03g0118 Cam-Chr3:2108061 4.60E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85291 PF00069 Pkinase 1.90E-23 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0047 - - - 0.0