Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0061 ATGAACAAATGTTCGACAAGACATGCAGAGTTGAGGTACGTGGTTGAAGTTTTTGATTCTTTTTGGGGTATGGCGAATCGGGTTGTTAAAGTGAAGAGGGAAGCCATTGCAGCATGCATAACTTGCCCACTTTGTAATAAGCTCTTGAAAGAAGCAACCACCATTTCTGAATGTCTTCATACTTTTTGCAGAAAGTGCATATCCGATAAGATTTCTGATGAGGAACTAGAAAACTGTCCAGTATGTAATATTGACCTCGGGTGTGTCCCACTGGAGAAATTAAGGCCAGACCACAATCTAGAAGATTTAAGGGCCAAGATTTTCCCTAGTAAAAGGAGAAAATTCAAGACACCGGAAGTTGTTCCTGTTATTCTACCACCAGTTAGAAGAAAGGAAAGATCACTTTCCTCATTGGTGGTCAATAGTCCAAGAGTGTCAAGTCATGCTACCGCAACTGGAAGAAGAACAGCAGCTGCTGCTGCAAGAATTGGTTCTGTTTTACGAACACCAAGAGTCTCTTCTGAGAAGCGAGTGAAGAAAGAGGATGATTCCATGGACGATGGTTCAGAGAGCTCAAGTTCTCTTGAGACATCAGACAAATTCAATCAGAATAAAAGGCCGGATTCCAGTCCTACCAAGTCGACCATACCTTTGCGCAATAAAGAAGCCGAAAATGGTGTTAACTCAGTGGAAGGGAACTTGGATATCTGGAAACCTCTAAATTTCTTAGTTGAGGTTGCAAATAGGAGTAAATGTTCCAAATCTAATTCGCAAGGATTCGAAACTAAAGTCGAGCCTGGAGAAGTTGATGGAAGTGAAGCTCAGGCCAGCAAATCTAGAAATAGGGAAGGCAAACGCAAGCAAAAACGTGAGAATGGAAAAACTAGAGCAGACCCAGTATCTCCAGAAACTGAAAAACCTAAGAAACTGCGTAGGGTCCGCCAGAAAAGGGAATCTTTTTATGGGGACTCCAGCCTTACACCTCAGGTTGTGTTGGATGCCTCTAGTGCTCGGCATGAAAGAAAAGCCGGTCCGATTTGGCTCTCACTCATAGCCTCTGATCAGGAAGGAGATGTATCGTTGCCACAAATTCCTGCGAAGTATTTGAGAATAAAGGATAGAAACTTGCCAGTATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCTCCCAAGTGAATCAGAGGTTGAAGTCAAGTGTATGGGACATCCAGTAGTTCCCACTCTGGATTTGCATAGTTTAGTTGATTTGTGGCTACAAACAGCATCAACCTCCGAAAAGATCCCGGCATCGATCGGCTCATCGGCGGAGGATTTCATTATGGTTCTCTACTATGCTAGAAAGATCACAGTTTCTTGA 1362 43.02 MNKCSTRHAELRYVVEVFDSFWGMANRVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCISDKISDEELENCPVCNIDLGCVPLEKLRPDHNLEDLRAKIFPSKRRKFKTPEVVPVILPPVRRKERSLSSLVVNSPRVSSHATATGRRTAAAAARIGSVLRTPRVSSEKRVKKEDDSMDDGSESSSSLETSDKFNQNKRPDSSPTKSTIPLRNKEAENGVNSVEGNLDIWKPLNFLVEVANRSKCSKSNSQGFETKVEPGEVDGSEAQASKSRNREGKRKQKRENGKTRADPVSPETEKPKKLRRVRQKRESFYGDSSLTPQVVLDASSARHERKAGPIWLSLIASDQEGDVSLPQIPAKYLRIKDRNLPVSFVQKYLMRKLDLPSESEVEVKCMGHPVVPTLDLHSLVDLWLQTASTSEKIPASIGSSAEDFIMVLYYARKITVS 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1759923 1763937 + CaPI482276_07g000610.1 Cam07g0061 130354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0061 453 MobiDBLite consensus disorder prediction 165 224 - -
Cam07g0061 453 MobiDBLite consensus disorder prediction 190 222 - -
Cam07g0061 453 SUPERFAMILY RING/U-box 38 107 - -
Cam07g0061 453 Gene3D - 327 432 - -
Cam07g0061 453 ProSiteProfiles Zinc finger RING-type profile. 42 83 IPR001841 -
Cam07g0061 453 CDD RING-HC_PCGF 40 83 - -
Cam07g0061 453 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 27 449 IPR044807 GO:0004842(InterPro)
Cam07g0061 453 MobiDBLite consensus disorder prediction 251 318 - -
Cam07g0061 453 Pfam Zinc finger, C3HC4 type (RING finger) 42 82 - -
Cam07g0061 453 MobiDBLite consensus disorder prediction 275 309 - -
Cam07g0061 453 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 133 IPR013083 -
Cam07g0061 453 MobiDBLite consensus disorder prediction 172 187 - -
Cam07g0061 453 ProSitePatterns Zinc finger RING-type signature. 58 67 IPR017907 -
Cam07g0061 453 SMART ring_2 42 82 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1731 Cam-Chr2:30380057 Cam07g0061 Cam-Chr7:1759923 1.50E-113 wgd
Cam05g0533 Cam-Chr5:4688147 Cam07g0061 Cam-Chr7:1759923 2.30E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0061 K16277 - csv:101220692 770.385