Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0065 ATGGAAGAGGTTGAAGAAGCTAACAAATCAGCCATAGAGAGCTGCCATGGAGTTTTGAATCTTTTAGTTCAACCTCCTCAAGACCAACTTCATTTCAGGAATCTAATGGTTGAAACTAAAGAAGCTGTTTTCAAGTTCAAGAAAGTTATTTCTCTCTTAAATTCTGGTTTTGGTCATGCCAGAGTTAGAAAATTCAACAAGATTCCTCTCCCTTTGCCTCAAAAATCCCTCTTAGATTCCCCAAATTACACTCCACATCCTCCAAACAAAAATCTTTACCCTTTTCACTCTGGTTTGAATGGTAAAGTTTCAATTTTTTTGGGAAACCCAGATTTAGAATTGAGTCCAAATGACAAGAATTCCCTCCAAATTCCCAAACAATCTCCATCTTTAAACTTCAGCTTCCCTCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGAGGATTTTGGCTCATCAGAAACAAATGAAACAGCAAGCAGAAATGATGTTTCTAAGGAATAACAGTGGGATGAACCTGAATTTTGACACATCTAATTGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGCAGCGTCGCCGACGGAAGCTCGTTCCATTTGATCGGACCGTCGTCAACAACAACGACGTCGGCCGATAACAAGAGGAAGTTTTCTGCAAGAGGAGATGAAGGAAGCTTGAAATGTGGAAGTACTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTACCTGCCATAAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCGGCAAGAAAGCATGTCGAGCGGTGCTTAGAAGACCCGTCGATGCTTATTGTAACGTATGAAGGAGAGCATAATCACCCGAAAATGTCGACGCAATCTGCACACACTTAG 1020 41.67 MEEVEEANKSAIESCHGVLNLLVQPPQDQLHFRNLMVETKEAVFKFKKVISLLNSGFGHARVRKFNKIPLPLPQKSLLDSPNYTPHPPNKNLYPFHSGLNGKVSIFLGNPDLELSPNDKNSLQIPKQSPSLNFSFPQQQQQQQQQQQQQRILAHQKQMKQQAEMMFLRNNSGMNLNFDTSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTTTTSADNKRKFSARGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1789548 1791255 + CaPI482276_07g000650.1 Cam07g0065 130358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0065 339 ProSiteProfiles WRKY domain profile. 266 332 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0065 339 Gene3D WRKY domain 255 331 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0065 339 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 335 IPR044810 GO:0003700(InterPro)
Cam07g0065 339 MobiDBLite consensus disorder prediction 210 224 - -
Cam07g0065 339 SUPERFAMILY WRKY DNA-binding domain 269 331 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0065 339 FunFam WRKY transcription factor 65 255 332 - -
Cam07g0065 339 MobiDBLite consensus disorder prediction 116 154 - -
Cam07g0065 339 Pfam WRKY DNA -binding domain 273 330 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0065 339 SMART WRKY_cls 271 331 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam07g0065 339 MobiDBLite consensus disorder prediction 210 232 - -
Cam07g0065 339 Pfam Plant zinc cluster domain 231 269 IPR018872 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1521 Cam-Chr6:26703692 Cam07g0065 Cam-Chr7:1789548 3.40E-39 dispersed
Cam07g0065 Cam-Chr7:1789548 Cam07g0260 Cam-Chr7:3680006 5.50E-23 dispersed
Cam07g0065 Cam-Chr7:1789548 Cam09g0739 Cam-Chr9:7474378 5.50E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52221 PF03106 WRKY 1.10E-26 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0065 - - - 0.0