Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g0065 | ATGGAAGAGGTTGAAGAAGCTAACAAATCAGCCATAGAGAGCTGCCATGGAGTTTTGAATCTTTTAGTTCAACCTCCTCAAGACCAACTTCATTTCAGGAATCTAATGGTTGAAACTAAAGAAGCTGTTTTCAAGTTCAAGAAAGTTATTTCTCTCTTAAATTCTGGTTTTGGTCATGCCAGAGTTAGAAAATTCAACAAGATTCCTCTCCCTTTGCCTCAAAAATCCCTCTTAGATTCCCCAAATTACACTCCACATCCTCCAAACAAAAATCTTTACCCTTTTCACTCTGGTTTGAATGGTAAAGTTTCAATTTTTTTGGGAAACCCAGATTTAGAATTGAGTCCAAATGACAAGAATTCCCTCCAAATTCCCAAACAATCTCCATCTTTAAACTTCAGCTTCCCTCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGAGGATTTTGGCTCATCAGAAACAAATGAAACAGCAAGCAGAAATGATGTTTCTAAGGAATAACAGTGGGATGAACCTGAATTTTGACACATCTAATTGCACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGCAGCGTCGCCGACGGAAGCTCGTTCCATTTGATCGGACCGTCGTCAACAACAACGACGTCGGCCGATAACAAGAGGAAGTTTTCTGCAAGAGGAGATGAAGGAAGCTTGAAATGTGGAAGTACTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTACCTGCCATAAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCTCCTCATCCCAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCGGCAAGAAAGCATGTCGAGCGGTGCTTAGAAGACCCGTCGATGCTTATTGTAACGTATGAAGGAGAGCATAATCACCCGAAAATGTCGACGCAATCTGCACACACTTAG | 1020 | 41.67 | MEEVEEANKSAIESCHGVLNLLVQPPQDQLHFRNLMVETKEAVFKFKKVISLLNSGFGHARVRKFNKIPLPLPQKSLLDSPNYTPHPPNKNLYPFHSGLNGKVSIFLGNPDLELSPNDKNSLQIPKQSPSLNFSFPQQQQQQQQQQQQQRILAHQKQMKQQAEMMFLRNNSGMNLNFDTSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTTTTSADNKRKFSARGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPKMSTQSAHT | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1789548 | 1791255 | + | CaPI482276_07g000650.1 | Cam07g0065 | 130358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g0065 | 339 | ProSiteProfiles | WRKY domain profile. | 266 | 332 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam07g0065 | 339 | Gene3D | WRKY domain | 255 | 331 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam07g0065 | 339 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 1 | 335 | IPR044810 | GO:0003700(InterPro) | |
Cam07g0065 | 339 | MobiDBLite | consensus disorder prediction | 210 | 224 | - | - | |
Cam07g0065 | 339 | SUPERFAMILY | WRKY DNA-binding domain | 269 | 331 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam07g0065 | 339 | FunFam | WRKY transcription factor 65 | 255 | 332 | - | - | |
Cam07g0065 | 339 | MobiDBLite | consensus disorder prediction | 116 | 154 | - | - | |
Cam07g0065 | 339 | Pfam | WRKY DNA -binding domain | 273 | 330 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam07g0065 | 339 | SMART | WRKY_cls | 271 | 331 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cam07g0065 | 339 | MobiDBLite | consensus disorder prediction | 210 | 232 | - | - | |
Cam07g0065 | 339 | Pfam | Plant zinc cluster domain | 231 | 269 | IPR018872 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g1521 | Cam-Chr6:26703692 | Cam07g0065 | Cam-Chr7:1789548 | 3.40E-39 | dispersed | |
Cam07g0065 | Cam-Chr7:1789548 | Cam07g0260 | Cam-Chr7:3680006 | 5.50E-23 | dispersed | |
Cam07g0065 | Cam-Chr7:1789548 | Cam09g0739 | Cam-Chr9:7474378 | 5.50E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52221 | PF03106 | WRKY | 1.10E-26 | CL0274 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g0065 | - | - | - | 0.0 |