Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0098 ATGGAATCCTCTTATTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAGCGGAATCATCGTTCTCATGGAGTGAATTTTTCTCGATTCACAGTACCCTAGAAAACTCAATCTCACTACACGAAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAACCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAAGAAAGGAAGACAACGGAGAAGAGTTACAGAGGAGTGAGACGGCGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTATGATCAAGCAGCATTTTCGATGAGAGGAGCAATGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTGAAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAGAGGAAACACTCAATGAGAAGGAAATCGGCGGCGGCGGCGGTGAAAAGCCAAGGGGCGGCGGAGAAGAAGAAGATGAAGAAAAACAACAATGTGGTGATTTTAGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGA 660 45.61 MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHEEFLGNQTSESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2132818 2133477 + CaPI482276_07g000980.1 Cam07g0098 130391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0098 219 MobiDBLite consensus disorder prediction 1 21 - -
Cam07g0098 219 Pfam AP2 domain 85 135 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0098 219 SMART rav1_2 85 149 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0098 219 PANTHER DNA-BINDING DOMAIN 47 193 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Cam07g0098 219 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0098 219 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0098 219 Gene3D AP2/ERF domain 84 145 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0098 219 FunFam Ethylene-responsive transcription factor 2 84 145 - -
Cam07g0098 219 SUPERFAMILY DNA-binding domain 85 145 IPR016177 GO:0003677(InterPro)
Cam07g0098 219 CDD AP2 86 144 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0098 219 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0702 Cam-Chr6:9450458 Cam07g0098 Cam-Chr7:2132818 1.00E-41 dispersed
Cam07g0098 Cam-Chr7:2132818 Cam09g0753 Cam-Chr9:7671872 1.30E-41 dispersed
Cam05g0492 Cam-Chr5:4340406 Cam07g0098 Cam-Chr7:2132818 2.10E-42 wgd
Cam06g0701 Cam-Chr6:9411834 Cam07g0098 Cam-Chr7:2132818 2.50E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52227 PF00847 AP2 1.20E-14 CL0081 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0098 K14516 - csv:101220325 297.745