Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0121 ATGCATGCCACGTGGCAAAAGTTATGGGTATTGCTGTTTCTGGATTTTGCCTTCCCTCGCTCTTCTTTTACTTTTGGGAAATTAAAAGATTTTTGGCTGCAGTCAAACAATATGAAGAGTGACGTTAAGATTAAAAGGGGGAGGAGCGCTGGAAAAAGGGAGAATATTAGGAAGATAATGAAGTGTTTATGTTCTGGAGAGAGAACAGCTGGGGATGATATGATTCCTGCAGCGGAATCGCCTTCTGCTTTCGAGAATTCAGGAAGTGGACGCTCTTCACGGACTGGGGAGATCGTCAAGAGGCCAGAAATTGGCAATATAGAAGAAGCTGAGTCTTCGCTTCGTGAGAGTGGTTGCTTAAATTATGAGGAAGCAAGAGCATTGCTAGGAAGATATGAATATCAAAAAGGAAATATTGAAGCTGCTCTTCATGTATTTGAAGGAATAGACATCACTGCTATAACTAGTAAGATAATGATCTCCATAGCTAGAAGAGGAGACCGTCCACAGAGACGATCACAGAATTTTACTGCACCGCCAATGTCTATGCATGCTGTTAGTTTACTCTTGGAAGCCATCCTTCTGAAAGCAAAATCATTGCAAGGCCTTGGGAGGTTTGGAGAAGCTGCTCAATCTTGCAAAGTTATTCTGGACATTCTTGAATCTTCATTTCCCGAAGGCTTGCCTGAAAACTTTGGTGCTGATTGTAAATTGCAGGAGACAGTTACAAAGGCCGTGGAGCTGCTACCAGAGTTATGGAAGCTAGCTGATGCTTCTCAAGAAGCGATCCTTTCATACCGGCGAGCACTTCTTCATCAGTGGAATCTTGATGCAGGAACCACTGCTCGAATCCAGAAAGAGTTTGCCATTTTTCTTCTGTACAGTGGATGTGAAGCTTGCCCTCCGAATCTCCGGTCCCAAATGGACAGCTCATTTGTACCAAAAAACAATATTGAAGAAGCTATACTCTTATTTATGATACTACTTAGAAAAGTTGTTCTTAAGAGGATTGATTGGGATCCATCAATCTTGGATCATCTCTCCTTTGCTCTAACAATATCAGGGGATACAAGGGCTTTAGCAGGTCAAATAGAGGAATTGCCTCCTGGGATTCTACATCGACAAGAAAGGTATCATGCTCTAGCTCTGTGTTACTATGGAGCGGGTGAAAACTTGACTGCTTTGAATCTGTTGAGGAAAGTGTTGGGTAATCATGAGGATCCTAAATCGCTTCCTGCTTTATTGATGGCGTCGAAGATTTGTGGAGAGAACTGCGACCTTGCTGAAGAGGGAACGAGTTTTGCTCATAGAGCTCTTCAAAACTTGGATCATGGATGTGATCAATTGGAAGGTGTTGCCAATTGTTTGTTGGGTGTCTCACTGTCTGTATATTCTAAATCTGCCACTGCAGATTCCGAGAAGTCCACCAGACAATCTGAGGCAATTGAGGCCTTGGAAGCCGCACGGAAGACGACTAGAACAGCTGACCCTAATGTCCTCTATCATTTGAGTCTTGAATATGCTGACGAGAGGAAGTTAGATTCAGCACTTTATTATGCAAAGAAGTGTCTCAAGCTGGAAGGTGGATCTAATGTTAAAACTTGGTTACTACTGGCTAGAATTCTCTCTGCCCAAAAACGATTTACAGATAGCGAAAGTATTATAAATGCAGCTCTAGATCAGACAGGGAAATGGGAGCAAGCCGAGTTGCTTCAAACGAAAGCAAAGCTTCTAATTGCACAGGATGAGTTTAAAGGTGCTATTGAGACTTATAGTCAATTACTCGCTGTTTTTCAAGTTCAGAGTAAAAATTTCAGTTTGGGAGATAAGAAGCTACATAAGAGCAGCAGAAATCATGCTAGAAGATTGCAATTGGAAGTGTGGCATGATCTAGCTGTAGTCTACATAAGGCTCTCACAATGGCACGACGCCGAGGCCTGCCTTTCAAAGTCGAAGGCCATCTCTTCTCATTCGGCACCTAGATGCCACATTACAGGTATGCTTTATGAAGCAAAAGGCTTGTATAAAGAAGCTCTGAAAGCTTTTATGGCTGCTCTGGACATTGATCCCGTTCATGTCCCAAGCTTGGTCTCATCTGCGGTGGTTATCAGACATCTCGGCCACCAATCGCATCCTGTCATTCGCAGCTTTTTGATGGATGCTCTACGGCTCGATCAAACGAACCATGCTGCGTGGTACAATCTTGGGCTATTCTACAAGTCTGAAGGAACCAAGTCTTCATTAGCAGAAGCTGTTGAATGTTTTGAGGCTGCAACTTTTCTTGAAGAGTCTGCTCCTGTTGAGCCCTTTAGATAA 2316 43.13 MHATWQKLWVLLFLDFAFPRSSFTFGKLKDFWLQSNNMKSDVKIKRGRSAGKRENIRKIMKCLCSGERTAGDDMIPAAESPSAFENSGSGRSSRTGEIVKRPEIGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIEAALHVFEGIDITAITSKIMISIARRGDRPQRRSQNFTAPPMSMHAVSLLLEAILLKAKSLQGLGRFGEAAQSCKVILDILESSFPEGLPENFGADCKLQETVTKAVELLPELWKLADASQEAILSYRRALLHQWNLDAGTTARIQKEFAIFLLYSGCEACPPNLRSQMDSSFVPKNNIEEAILLFMILLRKVVLKRIDWDPSILDHLSFALTISGDTRALAGQIEELPPGILHRQERYHALALCYYGAGENLTALNLLRKVLGNHEDPKSLPALLMASKICGENCDLAEEGTSFAHRALQNLDHGCDQLEGVANCLLGVSLSVYSKSATADSEKSTRQSEAIEALEAARKTTRTADPNVLYHLSLEYADERKLDSALYYAKKCLKLEGGSNVKTWLLLARILSAQKRFTDSESIINAALDQTGKWEQAELLQTKAKLLIAQDEFKGAIETYSQLLAVFQVQSKNFSLGDKKLHKSSRNHARRLQLEVWHDLAVVYIRLSQWHDAEACLSKSKAISSHSAPRCHITGMLYEAKGLYKEALKAFMAALDIDPVHVPSLVSSAVVIRHLGHQSHPVIRSFLMDALRLDQTNHAAWYNLGLFYKSEGTKSSLAEAVECFEAATFLEESAPVEPFR 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2409350 2414023 + CaPI482276_07g001210.1 Cam07g0121 130414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0121 771 SUPERFAMILY TPR-like 479 698 IPR011990 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 375 408 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 568 601 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 190 223 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 532 565 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 659 692 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 497 530 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 625 658 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 SMART tpr_5 729 765 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 Gene3D Tetratricopeptide repeat domain 260 602 IPR011990 GO:0005515(InterPro)
Cam07g0121 771 Pfam Tetratricopeptide repeat 666 691 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 ProSiteProfiles TPR repeat profile. 659 692 IPR019734 GO:0005515(InterPro)
Cam07g0121 771 MobiDBLite consensus disorder prediction 80 102 - -
Cam07g0121 771 Pfam Tetratricopeptide repeat 509 574 - -
Cam07g0121 771 Gene3D Tetratricopeptide repeat domain 603 765 IPR011990 GO:0005515(InterPro)
Cam07g0121 771 PANTHER PROTEIN NPG1 51 771 IPR043376 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g2128 Cam-Chr8:26663923 Cam07g0121 Cam-Chr7:2409350 1.70E-159 transposed
Cam11g1690 Cam-Chr11:29572260 Cam07g0121 Cam-Chr7:2409350 7.30E-171 transposed
Cam05g0464 Cam-Chr5:4132975 Cam07g0121 Cam-Chr7:2409350 1.50E-243 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0121 K21843 - csv:101223229 1343.56