Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0144 ATGGCAGAAATGGCCTGCTCCGCCGCTGACCTTCACCACCTCCTCGGCGGCTCAGCCAACGCCACTGCCGTTGCGGAGTACATTTGCAGCCGATTCGATTCCGTGTCGACGAAATTTGTCGACACAAGCTATGCGGTTGACAACACATACCTTCTGTTTTCAGCTTACCTTGTATTTGCAATGCAGCTTGGATTTGCAATGCTTTGTGCTGGGTCAGTTAGAGCCAAAAACACAATGAATATTATGTTAACTAATGTTCTTGATGCAGCTACTGGTGGAATATTTTATTATGTATTTGGGTTTGCTTTGGCATTTGGAACACCTTCAAATTCCTTCATTGGACACCATTATTTTGGACTCTCACAGTTTCCTTCTTCTTCATTTGATTATGGGTTCTTCCTTTTTCAATGGGCTTTTGCAATTGCTGCTGCTGGGATTACAAGTGGATCCATTGCTGAAAGAACTCAGTTTGTTGCCTATTTGATCTATTCCTCTGTTTTGACTGGTTGGGTATATCCAATCGTTTCTCATTGGTTTTGGTCGTCCGATGGGTGGGGAAGTGCCGCTCGGTCCGATAACCTCCTATTTGGGTCCGGCGTGATCGACTTCGCCGGCTCCGGCGTCGTCCACATGGTCGGCGGCATCGCCGGTTTATGGGGCGCCCTCATAGAAGGCCCTCGAATCGGCCGATTCGATCACGCCGGCCGCTCCGTCGCCCTCCGTGGCCACAGCGGCACATTGGTTGTTCTCGGCACTTTCCTCCTCTGGTTCGGCTGGTACGGCTTCAACCCCGGTTCATTTCTCAACATCCTCAAAGCCTACGGCCACCCCGCCGCCCCCTATTACGGCCAATGGAGCGCCATCGGCCGCACCGCCGTCACCACTACCCTCGCCGGCTGCACAGCAGCACTAACCACACTCTTCGGCAAACGCCTCCTCGTCGGCCACTGGAATGTCACCGATGTTTGCAACGGTTTATTAGGCGGATTCGCCGCCATAACCTCCGGTTGCGCGGTGGTGGATCCATGGGCAGCAATTGTGTGCGGGTTTGTCTCAGCCTGGGTTTTGATCGGATTCAACAAACTAGCGGAGAAAATGAAGTACGACGATCCACTAGAGGCGGCGCAATTGCACGGCGGTTGTGGAGCTTGGGGGATTTTGTTCACAGGGTTATTTGCAAAACAGGCTTATGTTAACGAGATTTATCCAGGGTCGCCGGAGAGGCCGTACGGGCTGTTGATGGGCGGCGGCGCGAGGTTGTTAGCGGCTCATTTAGTGCAAATTTTGTCGATTGTTGGTTGGGTTACTGTGACAATGGGGCTTGTTTTTTGGTTGTTGCATAAGTTTGAGTTGCTGAGGATTACGCCGGAGGAGGAGATGGCCGGAATGGACTTGACGAGCCACGGCGGTTTGGCTTATGTGTATAATGATGAAGAGAAGCTTTAA 1446 51.87 MAEMACSAADLHHLLGGSANATAVAEYICSRFDSVSTKFVDTSYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYVFGFALAFGTPSNSFIGHHYFGLSQFPSSSFDYGFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGWVYPIVSHWFWSSDGWGSAARSDNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHAGRSVALRGHSGTLVVLGTFLLWFGWYGFNPGSFLNILKAYGHPAAPYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVTDVCNGLLGGFAAITSGCAVVDPWAAIVCGFVSAWVLIGFNKLAEKMKYDDPLEAAQLHGGCGAWGILFTGLFAKQAYVNEIYPGSPERPYGLLMGGGARLLAAHLVQILSIVGWVTVTMGLVFWLLHKFELLRITPEEEMAGMDLTSHGGLAYVYNDEEKL 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2589311 2591744 + CaPI482276_07g001440.1 Cam07g0144 130437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0144 481 NCBIfam ammonium transporter 47 473 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam07g0144 481 PANTHER AMMONIUM TRANSPORTER 24 476 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
Cam07g0144 481 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam07g0144 481 Pfam Ammonium Transporter Family 50 473 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam07g0144 481 SUPERFAMILY Ammonium transporter 44 454 - -
Cam07g0144 481 FunFam Ammonium transporter 28 481 - -
Cam07g0144 481 Gene3D Ammonium transporter AmtB like domains 26 481 IPR029020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0144 Cam-Chr7:2589311 Cam11g1036 Cam-Chr11:19640884 9.30E-210 dispersed
Cam05g0432 Cam-Chr5:3919826 Cam07g0144 Cam-Chr7:2589311 5.60E-200 wgd
Cam06g0773 Cam-Chr6:10410022 Cam07g0144 Cam-Chr7:2589311 3.60E-204 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0144 K03320 - csv:101223077 905.205