Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0148 ATGCCTTTCTCGACTTTGCACCTTCTTTTGGTTCTTCATGCGTTCGATTTGCTTTTCTCTTGCTCAGGACAATCTTCAGTTTCACCACACATATACTTATCTCCTTCCTTCCAGCCAAACCTGCAAACAATGACCACGGAAATGTCAACAGAGCATGCAAGGTTGGAGTCGATAAGTTTTTCATTTGTGCCTTCAAAGTTACGTGGTAACTGGATATTTAAGTCTTCTTTGGGACCATCTACTGCTCCTGCACCCTCTCCAGGTCCTAGGAGTGCACCCTTACCCATCCGACATCATCGACGGCGTCGTGGACGACCTCATGTGGTTGCTCCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACTGCAGCTCCCTTTGGTTCACCTTGTGGCTGCGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTCCCTGTGATGAACGAGCTTGAAAGTGAGATTGCAGTGGGGACTTACTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAACTGCAGACAGTCAAAATCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTAGGAGAGAAGTTTGATAATACAACTGCAGTTCTGACATACAGAAGGTTTTGGGATAAAAAAGTGCATTTAAATATGACACTTTTTGGTGATTATGAAGTTGTCTACATCAGTTATCCAGGGATTCCTTCTTCCCCGCCATATGGAGGGTACATGGGAAGTGCTCCTAGTGGAAGTGCGGGTGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTCTCCATCTTTTTTAAATGGAGAAAAGTTGGCAGACCATCTAGTGCTGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCCTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCCCTAATTTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGACAAGTTTAGTTCAAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTGTGGTATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACTCGGGACAATCAGAATAGAGACCGTGAATTTATTGCCGAAGTTGAGATGTTGAGTAGACTGCATCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGAAGGACGAACTCGCTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCTCACTTGCATGGCATTGACAAGAGAAAAGGACCTCTTGACTGGGACGCACGATTAAAGATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCCCGCGTTATTCACCGTGATTTCAAGGCAAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAAGCAACGGAAGGAAGTGAACATATCTCAACACGGGTGATGGGGACTTTCGGGTATGTAGCCCCTGAATATGCAATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTACAGTTATGGAGTTGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCGGTGGACATGTCCCAACCACATGGTGAGGAGAATCTCGTAACGTGGGCGCGACCTCTATTGACCAGTAGAGAAGGTTTGGAGCAACTAGTGGATCCTTCTCTTGCTGGTACTTACGACTTCGATGACATGGCCAAGGTGGCTGCCATAGCTTCAATGTGCGTTCACCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTAAAACTAATATACAACGACACAGACGAGACGTGTGCAGATTACTGCAGTCAAAAGGAGTCCTCTGCTCGGGACTCAGATTTCAAAGGTGACCTTGTCCCATCCGACAGCAGTTGGTGGAATGCCGGTGGCCTCACACCCCGACTGACATATGGTCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGAGATGGAAAACCGCCCGTTTTCAACTTCAAGTTTGGTAGGCGACGAGATATCTTTGCCTATTCGGCATGGAAACAGGTCAGGTCCGTTACGAACCGCTCGAAGCAAGCCTGCGTTCTATAGATTTTCAGGAAGTAGGAGCGAGCATGGAGGATTTCTTACAAGGCCTCCTTGGAACAGCAGTGGGTTTTGGTCATTACGATTCTTCCTTCTTCTTTCCAAATCAACCAGGCTGAGAATGTCGTCGTCAACCTCCTCCTCCGTTTCGATTTCACTTCCTGAAAATCGTGTGGTTCTTCGTGTTGGTATTACGTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCACAAGCTTTAAGGTACAAGGTGGAGGAAATGTAGGTAATGCTTTAACTTCTGCGGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATACTCAAGGAAGGAGCATAATGGAGGAGCTAGAAGCTGATGGCATAGATACATCATTTCTTGTAGCACACTCGTACATGCATCCTCACCCCAGGATCTCCTCCGATGTGCCAGATGACCTTTCACGATCAAGCTTGCTGTCTGCTTTAAACGGGGCTAGAATTGTATATTCTGACGTAGGATTGCATGAAATTGCTTTGCTTGTTGCACGAGAGGCAGCTCGGCAGAAGATACCTATGTTGATCGATGCCGAAAGGAAAAAGGAAGGTGTGGATGATCTCCTGGCATTTGCTAGTTATATAGTCTGCTCAACAAAATTTCCACAGGAATGGACTGAGGCACCATCGATTCCATCTGCACTTCTTTCCATGCTTCTGCGATATCCAAAACTCAGATTTGTGATTGTCACCTTGGGTGAAAATGGATGCATAATGCTCGAAAGAAATATTGATGAAACACCTGATCAAATGGAAGAGTTTGAAGTAGACAACTTACTTGAAGTGGTCAAGAGCAGAAGGGATGAGAATATAAATGTTCCAACTTTTGTTTCATCGCCAGTGGCCAAGTTGAGAGCTGAGGGGATAGGGACAGTTTGTGGCAGGCTGTTGCTCGGGACAGCTGAAAAAATACCGGAGTCCGAGATTGTTGATACGACCGGTGCTGGAGATGCATTCGTTGGAGCAGTTCTTTATGCCTTATGTGCCAACATGCCACCAGAGAACTTATTGCCATTTTCTGCTCAAGTGGTTTTACGGCCACAAACTTGGGGAAAACAAGTTCTAATGCCAGATTTGATGCTTTCTTCTGATGAACCAGCTATTATGATGAAGCGTCATCACGTCGGCGCCGGTTCTCCTTACTCCATAAACAAAGATGATGCCATTGCCGGCTCTCCTTCCAAGCAATACGCTTCTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGCCATTTCTTTCTGCATATTCTGATTTCAGGCCCAGAATGTCCTCGTCAACCTCCTCCTCGCTTCCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAGGGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATAGTCAGGGAAGGAGCATAATTGAGGAGCTAGAAGCTGATGGCGTAGATACATCCTTTCTTGTAGTTTCTGAAGGGGGTACTTCACCATTTACCTATATTATTGTGGATAATAAAACGCACACTCGTACATGTATCCACACCCCAGGATCTCCTCCCATGGTGCCAGATGACCTTTCACGATCAAGCTTGCTGTCTGCATTAGATGGGGCTAGATTTGTATATTTTGACGTAAGATTGCATGAAACTGCTTTGCTTGTTGCACAAGAGGCAGCTCGGCAGAATATACCTATGTTGATCGATGCAGAAAGGAAAAGGGAAGGTCTCGATGATCTCCTGGCATTTGCCAGTTATGTTGTCTGCTCAACAAGATTTCCACAGGAATGGACAGAGGCACCATCGATTCCATCTGCACTTGTTTCCATGCTTCTGCGACTTCCAAAACTCAAATTCGTGATTGTCACATTGGGTGAAAATGGATGCATAATGCTCGAAAGAAGTACCAATGAAACATCTGATCAGATGGAAGAGTTTGAAGTAGACAGCTTACTTGAAATCGTCAAGAGCAGAAGGGATGAAAATATTAATGCTCCAACTTCCGTATCATCGCCAGTGGCCAAGTTGAGAGCTGAGGGGATAGGGACAGTTTGTGGCAGGCTGTTGCTCGGGACAGCTGAAAAAATACCAGTGTCTGAGATTGTTGATACAACTGGTGCTGGAGATGCGTTCATTGGAGCAGTTCTTTATGCCTTATGTGCCAACATGCCACCAGAGAAGCTATTGCCATTTTCCGCCCAAGTGGCTGCTGGATGTTGTCGTGCTTTGGGTGCACGAAGCGGTCTTCCATATCGTACGGATCCACGGCTGGCATCTTTCTTACATTAG 4713 45.17 MPFSTLHLLLVLHAFDLLFSCSGQSSVSPHIYLSPSFQPNLQTMTTEMSTEHARLESISFSFVPSKLRGNWIFKSSLGPSTAPAPSPGPRSAPLPIRHHRRRRGRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELESEIAVGTYLEQSQVKIMGATADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIASSTSVSLISTMPTSLQSVKTFALSELEKATDKFSSKRILGEGGFGRVYCGILEDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGFLTRPPWNSSGFWSLRFFLLLSKSTRLRMSSSTSSSVSISLPENRVVLRVGITSVDFLAAVASYPNPDDKIRTTSFKVQGGGNVGNALTSAARLGLTPRIISKVADDTQGRSIMEELEADGIDTSFLVAHSYMHPHPRISSDVPDDLSRSSLLSALNGARIVYSDVGLHEIALLVAREAARQKIPMLIDAERKKEGVDDLLAFASYIVCSTKFPQEWTEAPSIPSALLSMLLRYPKLRFVIVTLGENGCIMLERNIDETPDQMEEFEVDNLLEVVKSRRDENINVPTFVSSPVAKLRAEGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFVGAVLYALCANMPPENLLPFSAQVVLRPQTWGKQVLMPDLMLSSDEPAIMMKRHHVGAGSPYSINKDDAIAGSPSKQYASSFFSNLPSLLQINQPFLSAYSDFRPRMSSSTSSSLPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVADDSQGRSIIEELEADGVDTSFLVVSEGGTSPFTYIIVDNKTHTRTCIHTPGSPPMVPDDLSRSSLLSALDGARFVYFDVRLHETALLVAQEAARQNIPMLIDAERKREGLDDLLAFASYVVCSTRFPQEWTEAPSIPSALVSMLLRLPKLKFVIVTLGENGCIMLERSTNETSDQMEEFEVDSLLEIVKSRRDENINAPTSVSSPVAKLRAEGIGTVCGRLLLGTAEKIPVSEIVDTTGAGDAFIGAVLYALCANMPPEKLLPFSAQVAAGCCRALGARSGLPYRTDPRLASFLH 1570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2621570 2643442 + CaPI482276_07g001480.1 Cam07g0148 130441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0148 1570 Pfam Protein tyrosine and serine/threonine kinase 374 642 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g0148 1570 Gene3D Phosphorylase Kinase; domain 1 343 446 - -
Cam07g0148 1570 CDD STKc_IRAK 377 646 - -
Cam07g0148 1570 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 1207 1569 IPR052562 -
Cam07g0148 1570 FunFam receptor-like serine/threonine-protein kinase ALE2 344 446 - -
Cam07g0148 1570 SUPERFAMILY Ribokinase-like 808 1114 IPR029056 -
Cam07g0148 1570 Gene3D - 1216 1555 IPR029056 -
Cam07g0148 1570 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 1511 1524 IPR002173 GO:0016301(InterPro)
Cam07g0148 1570 Gene3D - 807 1117 IPR029056 -
Cam07g0148 1570 Pfam pfkB family carbohydrate kinase 810 889 IPR011611 -
Cam07g0148 1570 Pfam pfkB family carbohydrate kinase 1220 1444 IPR011611 -
Cam07g0148 1570 Pfam pfkB family carbohydrate kinase 1502 1558 IPR011611 -
Cam07g0148 1570 Pfam pfkB family carbohydrate kinase 1075 1113 IPR011611 -
Cam07g0148 1570 MobiDBLite consensus disorder prediction 79 115 - -
Cam07g0148 1570 PRINTS Ribokinase signature 810 831 IPR002139 GO:0016301(InterPro)
Cam07g0148 1570 PRINTS Ribokinase signature 1001 1012 IPR002139 GO:0016301(InterPro)
Cam07g0148 1570 PRINTS Ribokinase signature 837 856 IPR002139 GO:0016301(InterPro)
Cam07g0148 1570 MobiDBLite consensus disorder prediction 94 108 - -
Cam07g0148 1570 SUPERFAMILY Ribokinase-like 1217 1561 IPR029056 -
Cam07g0148 1570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g0148 1570 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524(InterPro)
Cam07g0148 1570 Gene3D Transferase(Phosphotransferase) domain 1 447 669 - -
Cam07g0148 1570 SUPERFAMILY Protein kinase-like (PK-like) 355 649 IPR011009 -
Cam07g0148 1570 FunFam Receptor-like serine/threonine-protein kinase ALE2 447 663 - -
Cam07g0148 1570 CDD ribokinase_group_B 1216 1559 - -
Cam07g0148 1570 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 1084 1097 IPR002173 GO:0016301(InterPro)
Cam07g0148 1570 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0148 Cam-Chr7:2621570 Cam09g0060 Cam-Chr9:1502068 1.20E-170 dispersed
Cam07g1232 Cam-Chr7:26699487 Cam07g0148 Cam-Chr7:2621570 2.80E-55 dispersed
Cam08g1045 Cam-Chr8:16724253 Cam07g0148 Cam-Chr7:2621570 1.20E-67 dispersed
Cam07g0148 Cam-Chr7:2621570 Cam03g1572 Cam-Chr3:30707699 1.90E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85294 PF07714 PK_Tyr_Ser-Thr 7.50E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0148 - - - 0.0