Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0188 ATGGGCGGCCGCACGTTGTTCACTTTGGCTGAGGTTGCCTCCCATGACAATCGCAACGACTGCTGGTTGATCATCGAAGACAAGGTGTATGATGTAACAAAATTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGGCAGGCGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTCGGGCACAGTAGTGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGACTATTCCTGTGAAAAGGAAGTACACTCCTCCAAAGCAGCCACTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCCTGGTAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATACCAAAACAACTTAA 402 46.27 MGGRTLFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLAGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPVKRKYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILGLAFGIHLYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3080137 3082181 - CaPI482276_07g001880.1 Cam07g0188 130481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0188 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Cam07g0188 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Cam07g0188 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Cam07g0188 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Cam07g0188 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Cam07g0188 133 PANTHER CYTOCHROME B5 6 126 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cam07g0188 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 91 IPR036400 -
Cam07g0188 133 FunFam Cytochrome b5 type B 2 84 - -
Cam07g0188 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037(InterPro)
Cam07g0188 133 SMART Cyt_b5_2 7 80 IPR001199 -
Cam07g0188 133 Gene3D - 3 85 IPR036400 -
Cam07g0188 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0188 Cam-Chr7:3080137 Cam08g1498 Cam-Chr8:21197386 3.70E-23 dispersed
Cam11g0220 Cam-Chr11:3728512 Cam07g0188 Cam-Chr7:3080137 1.10E-15 transposed
Cam05g0384 Cam-Chr5:3533029 Cam07g0188 Cam-Chr7:3080137 4.60E-50 wgd
Cam06g0799 Cam-Chr6:10986942 Cam07g0188 Cam-Chr7:3080137 3.30E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0188 K23490 - csv:101212882 260.766