Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0216 ATGGCACCGCTCTTAAACGATCACTTCAGTTTTCAAACGCCAGAAAATGAGGCTGTTATTACTAAAAAAATTCCTCGCTCTGAACACACCAACAAGTATCCTACTTGGTATTCACCAGATACAGGAATTTGTCGTAGTGTTCATGCCCCCAGAGAAGTTCCCTCTGACCCATTTCTTGATGTTGTCTCCTTCATCTTCTCCTTCCAACACAATGGACATTCAGCTCTCATTGATTCCTCAACTGGAAATTCAATATCTTACAGAGAAATGTTTCGTATGGTCAAGTCTGTGGCTTCTGGCCTCCACAAGTTGGGTATATCACAAGGGGATGTAGTTTTGCTTGTGATACCAAATTCCATTTTCTATCCCATTATTCTTTTGGGGGTCCTGTATTTGGGAGCAGTTATTACAACCATGTTTCCTCAAAGCAGTTCCGCAGAAATCAAGAAACGAACCAGTGATTGCAATGTGCGTTTCGCTTTTACAATGACTCAGAAAATTAAGAATTTTGAAGCACTGGGAATTCAGGCAATTGGGGTACCAGAAAATACGAATTTGGACTTGATGAGGCCTATGGGATTTTCTTCTTTTTATGAGCTTATTTCAGGTGGTTCTGATTTGAATAAAAGACCAGTGATTAGACAAGAAGATACGGCTGCTATATTGTTTTCTTCAGGTACTACTGGAGTGAGCAAAGGGGTTTTGTTAACACATAGAAATTTCCTATCTACGATCGAGCTTTTTGTCCGGTTTGAAGCTTCACAGTATGAATATTTGCCTACAGAGAATGTGTATTTGGCTGCTATACCAATGTTTCATATATATGGTCTCTCCATTTTTGTGATGGGATTAATGTCATTGGGGTCTAGTATTGTTGTAATGAGCAAATTTGATGTCAAAGAGGTGGTCAAGGCTATTGACAGATTTAAAGTCACACATTTTCCAGTTGTTCCACCAATAATGACAACTATGGCTAGGACTGCAGAGAAAATTGGTGTCCATAGATTTAGAAGTTTGAAACAAGTTTCTTGTGGGGCTGCTTCTTTGAACAAGAAGACCATTGACGATTTTGTGCAGGCTCTCCCTCATGTTGACTTCATTCAGGGATATGGCATGACTGAGTCCACAGCTGTAGGAACCCGCGGCTTCAATACCAAAAATATTAGAAATTATTTGTCAGTGGGACTTTTAGCTCCAAACACAGAAGCTAAAGTAGTTGATTGGGTTACCGGATCTTTCGTGCCTCCTGGTAAAACTGGCGAACTTTTGTTACGCGGACCTGGTTCAATGAAAGGGTACTTGAATAATCCAGAGGCAACAATGTCCACAATAGACCAAGAAAATTGGCTACATACTGGAGACATTGTCTACTTTGACCGAGAAGGATACTTATATGTTGTTGACCGTTTGAAGGAGGTTATAAAGTATAAAGGCTTTCAGATTGCTCCTACTGATTTAGAAGCTGTGGTGATCACACATCCAGAAGTTCTTGATACTGCAGTAACAGCGGCCAAAGATGAAGAATGTGGAGAGATTCCAGTGGCATTTGTGGTAAAGAAGCCAGGAAGCACACTCTCACAAAAAGATGTTATTGATTATGTTGCTCAACAGGTTGCACCATATAAAAAAATCAGAAAAGTGGTTTTTACAGAATCAATACCAAAATCTGCTGCTGGCAAAGTACTTCGTAAGGAACTGGGGAAGTATATGCCTTCTAAACTATGA 1725 40.0 MAPLLNDHFSFQTPENEAVITKKIPRSEHTNKYPTWYSPDTGICRSVHAPREVPSDPFLDVVSFIFSFQHNGHSALIDSSTGNSISYREMFRMVKSVASGLHKLGISQGDVVLLVIPNSIFYPIILLGVLYLGAVITTMFPQSSSAEIKKRTSDCNVRFAFTMTQKIKNFEALGIQAIGVPENTNLDLMRPMGFSSFYELISGGSDLNKRPVIRQEDTAAILFSSGTTGVSKGVLLTHRNFLSTIELFVRFEASQYEYLPTENVYLAAIPMFHIYGLSIFVMGLMSLGSSIVVMSKFDVKEVVKAIDRFKVTHFPVVPPIMTTMARTAEKIGVHRFRSLKQVSCGAASLNKKTIDDFVQALPHVDFIQGYGMTESTAVGTRGFNTKNIRNYLSVGLLAPNTEAKVVDWVTGSFVPPGKTGELLLRGPGSMKGYLNNPEATMSTIDQENWLHTGDIVYFDREGYLYVVDRLKEVIKYKGFQIAPTDLEAVVITHPEVLDTAVTAAKDEECGEIPVAFVVKKPGSTLSQKDVIDYVAQQVAPYKKIRKVVFTESIPKSAAGKVLRKELGKYMPSKL 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3293407 3297265 - CaPI482276_07g002160.1 Cam07g0216 130509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0216 574 Pfam AMP-binding enzyme 70 434 IPR000873 -
Cam07g0216 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 566 - GO:0005777(PANTHER)|GO:0006744(PANTHER)|GO:0016405(PANTHER)
Cam07g0216 574 FunFam 4-coumarate--CoA ligase 2 472 573 - -
Cam07g0216 574 CDD 4CL 53 566 - -
Cam07g0216 574 Gene3D - 47 471 IPR042099 -
Cam07g0216 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 49 471 - -
Cam07g0216 574 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
Cam07g0216 574 Gene3D - 472 571 IPR045851 -
Cam07g0216 574 Pfam AMP-binding enzyme C-terminal domain 486 560 IPR025110 -
Cam07g0216 574 SUPERFAMILY Acetyl-CoA synthetase-like 69 569 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0216 Cam-Chr7:3293407 Cam10g1974 Cam-Chr10:33665979 6.10E-107 dispersed
Cam07g0216 Cam-Chr7:3293407 Cam10g1398 Cam-Chr10:27656377 5.00E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0216 K01904 - csv:101219578 1018.45