Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g0221 | ATGGAGCGGAATTACCCGTATGAGAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGCCCTGAAAAAGCAACTCCCAAGTCTGTCTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGCCATTTGCAGAAATATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTCAAAAGAATGAAAGCAGTGGGACTCTTAGCAATTTCACCGGTGTAGAGGAAGATGACAGAGGGATGCAAATTGCCGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTAGAGGTACAAAATAAACTACAAATGAGAATAGAAGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTCGCCATTGGCAGTAACCTTGGTAGTATTGAAAGCACAGGAATGCAGTTAATAAACTTTGATGCGGCTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAGGCATAGCAGACGTAAATGGTGTTTGTAAGAAGACCAATGATTCACTTATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGCTACAATAAACGAGTTTAATGTTGAAAAGAATATGATCAACTTTGATTTGAATTCCAAAGGCGGCTATGATTACAGTGCAAATGCGGCTGAAATACTTGACGCCAAAGTACTTCCTTGTTCAAGGTAA | 783 | 41.12 | MERNYPYENGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNVAQKNESSGTLSNFTGVEEDDRGMQIAEALKSHVEVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAIGSNLGSIESTGMQLINFDAALSDQIEKFKKQEMRGGIADVNGVCKKTNDSLIQICKVEAGEEATINEFNVEKNMINFDLNSKGGYDYSANAAEILDAKVLPCSR | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3340210 | 3343611 | + | CaPI482276_07g002210.1 | Cam07g0221 | 130514 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g0221 | 260 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 8 | 239 | IPR046955 | GO:0003700(InterPro) | |
Cam07g0221 | 260 | FunFam | Myb family transcription factor | 17 | 75 | - | - | |
Cam07g0221 | 260 | Pfam | MYB-CC type transfactor, LHEQLE motif | 104 | 150 | IPR025756 | - | |
Cam07g0221 | 260 | Pfam | Myb-like DNA-binding domain | 20 | 71 | IPR001005 | - | |
Cam07g0221 | 260 | Gene3D | - | 17 | 74 | - | - | |
Cam07g0221 | 260 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 15 | 75 | IPR017930 | - | |
Cam07g0221 | 260 | SUPERFAMILY | Homeodomain-like | 18 | 75 | IPR009057 | - | |
Cam07g0221 | 260 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 18 | 72 | IPR006447 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0128 | Cam-Chr7:2465804 | Cam07g0221 | Cam-Chr7:3340210 | 6.20E-26 | dispersed | |
Cam07g0221 | Cam-Chr7:3340210 | Cam10g1350 | Cam-Chr10:27048381 | 4.30E-28 | dispersed | |
Cam07g0221 | Cam-Chr7:3340210 | Cam09g2321 | Cam-Chr9:37620261 | 3.40E-33 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52236 | PF00249 | Myb_DNA-binding | 2.70E-07 | CL0123 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g0221 | - | - | - | 0.0 |