Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0221 ATGGAGCGGAATTACCCGTATGAGAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGCCCTGAAAAAGCAACTCCCAAGTCTGTCTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGCCATTTGCAGAAATATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTCAAAAGAATGAAAGCAGTGGGACTCTTAGCAATTTCACCGGTGTAGAGGAAGATGACAGAGGGATGCAAATTGCCGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTAGAGGTACAAAATAAACTACAAATGAGAATAGAAGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTCGCCATTGGCAGTAACCTTGGTAGTATTGAAAGCACAGGAATGCAGTTAATAAACTTTGATGCGGCTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAGGCATAGCAGACGTAAATGGTGTTTGTAAGAAGACCAATGATTCACTTATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGCTACAATAAACGAGTTTAATGTTGAAAAGAATATGATCAACTTTGATTTGAATTCCAAAGGCGGCTATGATTACAGTGCAAATGCGGCTGAAATACTTGACGCCAAAGTACTTCCTTGTTCAAGGTAA 783 41.12 MERNYPYENGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNVAQKNESSGTLSNFTGVEEDDRGMQIAEALKSHVEVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAIGSNLGSIESTGMQLINFDAALSDQIEKFKKQEMRGGIADVNGVCKKTNDSLIQICKVEAGEEATINEFNVEKNMINFDLNSKGGYDYSANAAEILDAKVLPCSR 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3340210 3343611 + CaPI482276_07g002210.1 Cam07g0221 130514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0221 260 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 239 IPR046955 GO:0003700(InterPro)
Cam07g0221 260 FunFam Myb family transcription factor 17 75 - -
Cam07g0221 260 Pfam MYB-CC type transfactor, LHEQLE motif 104 150 IPR025756 -
Cam07g0221 260 Pfam Myb-like DNA-binding domain 20 71 IPR001005 -
Cam07g0221 260 Gene3D - 17 74 - -
Cam07g0221 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Cam07g0221 260 SUPERFAMILY Homeodomain-like 18 75 IPR009057 -
Cam07g0221 260 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 72 IPR006447 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0128 Cam-Chr7:2465804 Cam07g0221 Cam-Chr7:3340210 6.20E-26 dispersed
Cam07g0221 Cam-Chr7:3340210 Cam10g1350 Cam-Chr10:27048381 4.30E-28 dispersed
Cam07g0221 Cam-Chr7:3340210 Cam09g2321 Cam-Chr9:37620261 3.40E-33 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52236 PF00249 Myb_DNA-binding 2.70E-07 CL0123 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0221 - - - 0.0