Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0243 ATGACTCTATTTCCATTCTCATTCTTGTTCGTAGTACTTCTTCAGTTATCTTTTCTGTTTAATAGTCTGACCGCCAAAAACGGCGACCACCACCACCACCACCATGTCCGATCACCAGGACTGAACACGAACCCGAACCCGCGACTCCATCAAGCATTCCTTGCTCTCCAAGCATGGAAAAAAGTCATTTACTCGGACCCAAAAAACCACACTACCAATTGGGTGGGGCCATCAGTTTGCAACTACTTTGGAGTGTATTGTGCCTCATCTCTTGATGACCCAAAAATCCAAGTGGTCGCCGGAATTGACTTAAACCACGGCGACATCGCCGGATTCCTCCCTAACGAATTGGGCCTTTTAACAGATCTTGCTCTGCTTCATCTCAACAGCAACCGATTCTGTGGCATTTTGCCACAATCTTTAGCCAATTTATCTCTTCTCTTTGAATTAGATTTAAGCAACAACAGATTCGTAGGCCCTTTTCCTTCTGTTGTTCTTCTCCTTCCAAAATTAACATATCTTGATCTTCGATTCAACGAATTTGAAGGCCCAATTCCCTCTGAACTCTTCAACAAAACCCTCGACGCCATTTTTATCAACAGCAATCGTTTCACCAACATTATCCCACGAAACATCGGTGGAAAATCTGCCTCTGTGATTGTCTTTGCTAACAACAATTTAAAGGGTTGTCTTCCACCCACAATTGCAAGTTTTGCAAACAGTTTAGAAGAGCTTTTGTTGATCAACACTAGTTTATCTGGCTGTTTGCCACAAGAAATTGGGTTTTTGTATAAATTGAAGGTTTTGGATGTGAGTTTTAACAAATTAATGGGTCCTTTGCCTTATAGTTTAGCTGGGTTAGCTCAATTGGAGCAATTGAATTTAGCCCATAATTTGTTTAGTGGGAATTTGTATGAAGGTATCTGTAGCCTTCCGAATTTGGAGAATGTGACAGTTTCTTATAATTACTTTTGTGAAGAAGAAGGGATTTGCCGGAATTTGACGGCGAAAGGGATTGCTTTTGATGATCGGCGGAATTGCTTGCCGGAGAAGCCGTTGCAGAGGAGTAAAAAGGAGTGTAGTGCGGTGGTTGAGCGTCCTGTGGACTGTTTTGAGCATCCGTGCGGCGGCGGCGGAGGTAATGGTTCTAGTATTGCGGCGGTTCCGGCTCCGACGCCAGTTTCTTCACCTTCTTCCTTTGTTGCCCCTTCCCACTTGTGA 1221 43.73 MTLFPFSFLFVVLLQLSFLFNSLTAKNGDHHHHHHVRSPGLNTNPNPRLHQAFLALQAWKKVIYSDPKNHTTNWVGPSVCNYFGVYCASSLDDPKIQVVAGIDLNHGDIAGFLPNELGLLTDLALLHLNSNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVVLLLPKLTYLDLRFNEFEGPIPSELFNKTLDAIFINSNRFTNIIPRNIGGKSASVIVFANNNLKGCLPPTIASFANSLEELLLINTSLSGCLPQEIGFLYKLKVLDVSFNKLMGPLPYSLAGLAQLEQLNLAHNLFSGNLYEGICSLPNLENVTVSYNYFCEEEGICRNLTAKGIAFDDRRNCLPEKPLQRSKKECSAVVERPVDCFEHPCGGGGGNGSSIAAVPAPTPVSSPSSFVAPSHL 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3571961 3573181 - CaPI482276_07g002430.1 Cam07g0243 130536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0243 406 MobiDBLite consensus disorder prediction 388 406 - -
Cam07g0243 406 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 392 IPR051582 -
Cam07g0243 406 Gene3D Ribonuclease Inhibitor 53 215 IPR032675 -
Cam07g0243 406 Pfam Leucine Rich Repeat 265 287 IPR001611 GO:0005515(InterPro)
Cam07g0243 406 Pfam Leucine Rich Repeat 289 311 IPR001611 GO:0005515(InterPro)
Cam07g0243 406 Pfam Leucine Rich Repeat 147 163 IPR001611 GO:0005515(InterPro)
Cam07g0243 406 Pfam Leucine Rich Repeat 125 144 IPR001611 GO:0005515(InterPro)
Cam07g0243 406 Pfam Leucine Rich Repeat 170 191 IPR001611 GO:0005515(InterPro)
Cam07g0243 406 SUPERFAMILY L domain-like 52 326 - -
Cam07g0243 406 Gene3D Ribonuclease Inhibitor 216 340 IPR032675 -
Cam07g0243 406 FunFam Leucine-rich repeat extensin-like protein 1 53 214 - -
Cam07g0243 406 MobiDBLite consensus disorder prediction 386 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0566 Cam-Chr5:5031096 Cam07g0243 Cam-Chr7:3571961 2.10E-47 dispersed
Cam07g0243 Cam-Chr7:3571961 Cam11g0299 Cam-Chr11:4501598 3.00E-28 dispersed
Cam07g0243 Cam-Chr7:3571961 Cam06g1139 Cam-Chr6:21748379 2.00E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0243 - - - 0.0