Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0248 ATGACCACCGGAAGGGAAATTCTCCACAAGATGAAGGTGAAAGCAGGGTTTTGTTCATCAGCAGCTGATACAGGGAAAGGCAAAGGCAAATTGACGACAAATAATAATAATAATAATAATAATAAGAATATAAGCCATGGGAGTTATTTGGTGAAGGGAAAAGGCAACCATCCAATGGAAGATTACTTGGTTTCCGATTTCAAGCGAGTCAAAGAACATGATTTGGGTTTGTTTGCCATTTTCGATGGCCATTTGGGCCACGATGTTGCTAATTTCTTGCAAAATAATCTCTTTCATAACATCCTCAAAGAGGCTGATTTCTGGAGCGAAACAAGAAAAGCCATAAAAAGAGCTTACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGCAACTTGGAAAAGGAGGATCAACGGCCGTAACCGCGATCTTGATCGACGGCCACAAACTTGTGGTTGCCAACGTCGGAGATTCTAGAGCTGTTTTGTGCAGAAACGGCGTCGCCGAGCAACTTTCCGTTGACCACGAACCCACCAAAGAGAAAAGAGAAATTGAAAGCCGTGGTGGTTTTGTATCAAATATTCCAGGAGATGTTCCACGTGTCGACGGACAATTGGCGGTGGCCAGAGCATTTGGAGATAAGAGTTTAAAAGTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGACGAAACTACAGAGTTCATGATTTTGGCTAGCGATGGCATATGGAAGGTGATGACAAACCAAGAAGCAGTAGAATCAATTAGACATATAAAGGATGCGAACATAGCAGCCAGACGACTTATCGACGAAGCAGTGTCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAATGA 882 42.63 MTTGREILHKMKVKAGFCSSAADTGKGKGKLTTNNNNNNNNKNISHGSYLVKGKGNHPMEDYLVSDFKRVKEHDLGLFAIFDGHLGHDVANFLQNNLFHNILKEADFWSETRKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDGHKLVVANVGDSRAVLCRNGVAEQLSVDHEPTKEKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKVHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNQEAVESIRHIKDANIAARRLIDEAVSRKSKDDISCIVVRFQ 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3602918 3606307 + CaPI482276_07g002480.1 Cam07g0248 130541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0248 293 MobiDBLite consensus disorder prediction 24 47 - -
Cam07g0248 293 SMART PP2C_4 40 290 IPR001932 -
Cam07g0248 293 ProSiteProfiles PPM-type phosphatase domain profile. 45 292 IPR001932 -
Cam07g0248 293 FunFam Probable protein phosphatase 2C 39 36 293 - -
Cam07g0248 293 SUPERFAMILY PP2C-like 39 292 IPR036457 -
Cam07g0248 293 CDD PP2Cc 44 292 IPR001932 -
Cam07g0248 293 SMART PP2C_SIG_2 50 292 IPR001932 -
Cam07g0248 293 MobiDBLite consensus disorder prediction 26 47 - -
Cam07g0248 293 Gene3D - 28 293 IPR036457 -
Cam07g0248 293 Pfam Protein phosphatase 2C 57 285 IPR001932 -
Cam07g0248 293 PANTHER PROTEIN PHOSPHATASE 39 290 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2578 Cam-Chr1:37414230 Cam07g0248 Cam-Chr7:3602918 4.30E-85 dispersed
Cam06g0726 Cam-Chr6:9822708 Cam07g0248 Cam-Chr7:3602918 4.50E-28 dispersed
Cam07g0248 Cam-Chr7:3602918 Cam10g0905 Cam-Chr10:20267856 2.60E-82 dispersed
Cam11g1437 Cam-Chr11:27092904 Cam07g0248 Cam-Chr7:3602918 5.40E-89 transposed
Cam11g1818 Cam-Chr11:30703321 Cam07g0248 Cam-Chr7:3602918 3.40E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0248 K17506 - csv:101211399 496.508