Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g0249 | ATGAGCAGCGTTTGTGCGGAGCAACAGAAATTTCAATTTCAATTTCAATTTCCGTCTTCTGCTTCTGCTGCTTCTTCTTCGTGTTCTTCGTGGTTTCTTAAGGATATTAACGTTCCGCCGAGGAAGCTTGTCGCTGCGGTGAGACGAGAAAACGGTGAAATGTGTTCTGATTCGCCGCGGTTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTTAATGGCGAGGATGAAGCGGAGGAGGATGGAGATCCGTATTCGTCAGACCATTTTCGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCAGGAGAGAAGGCACGGAGGCGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGAGTTTCGTCGCGGCGGTTGTGGCCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAATGTTGGCTTCATCCCGCGAGGTATCGTACTGAAGCTTGTAAAGATGGAAAAAATTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCTCCTGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCACCGAATAAGAGAAATTCTGGTCTTAGATCGGCCACTTCCGGTTCTAATCACTGCTGTTTGTTTTGTCATTGCGGTGGAGCCGCCACTTCCTCACCGACTTCAACGCTTTTCGGGATGTCTCATCTGTCTCCGCCACACTCTCCGCCGCTCTCGCCGGGAAAACCTCGGTCATCGATTAATGGATTTTCACCGATTTCGAGGTACAATCCTGATCAGTCTAAGTTAAATGGAGTTTTGAGCTATAAAGATGCACTGACTGAGCTGATGAGCTCAATTGAATCCATGAATATCGACGACGCCAATGCCACTTTAGCCGCCGCCGCCGCCGCCGCCGCCACTCCAAGACAGACGATTCCTTGGATCGATGTTTCATCTCTCAACTCTGAAGATCAACTGCAGTTTGTTCTCTCACCTTCTACTCCAAACGTGTCCGTCGAGAACAAAGGTAACCCCGACAATGGATGGGCCTCCTCCTCCGATCCGGATCTTGGATGGGTTAATGATCTGCTGATGTAA | 1143 | 48.73 | MSSVCAEQQKFQFQFQFPSSASAASSSCSSWFLKDINVPPRKLVAAVRRENGEMCSDSPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSPNKRNSGLRSATSGSNHCCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSPGKPRSSINGFSPISRYNPDQSKLNGVLSYKDALTELMSSIESMNIDDANATLAAAAAAAATPRQTIPWIDVSSLNSEDQLQFVLSPSTPNVSVENKGNPDNGWASSSDPDLGWVNDLLM | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3611851 | 3612993 | + | CaPI482276_07g002490.1 | Cam07g0249 | 130542 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g0249 | 380 | MobiDBLite | consensus disorder prediction | 262 | 277 | - | - | |
Cam07g0249 | 380 | PANTHER | UNKEMPT FAMILY MEMBER | 59 | 325 | IPR045234 | - | |
Cam07g0249 | 380 | FunFam | Zinc finger CCCH domain-containing protein 66 | 90 | 158 | - | - | |
Cam07g0249 | 380 | MobiDBLite | consensus disorder prediction | 348 | 366 | - | - | |
Cam07g0249 | 380 | ProSiteProfiles | Zinc finger C3H1-type profile. | 133 | 159 | IPR000571 | GO:0046872(InterPro) | |
Cam07g0249 | 380 | Gene3D | - | 132 | 195 | - | - | |
Cam07g0249 | 380 | SMART | c3hfinal6 | 132 | 158 | IPR000571 | GO:0046872(InterPro) | |
Cam07g0249 | 380 | SMART | c3hfinal6 | 167 | 190 | IPR000571 | GO:0046872(InterPro) | |
Cam07g0249 | 380 | MobiDBLite | consensus disorder prediction | 348 | 369 | - | - | |
Cam07g0249 | 380 | MobiDBLite | consensus disorder prediction | 247 | 277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0249 | Cam-Chr7:3611851 | Cam11g0200 | Cam-Chr11:3522594 | 3.80E-57 | dispersed | |
Cam07g0249 | Cam-Chr7:3611851 | Cam05g1935 | Cam-Chr5:28293110 | 2.60E-58 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52241 | None | None | None | None | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g0249 | K23047 | - | csv:101211149 | 603.208 |