Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0250 ATGAAGCGTTATGTTTACATCAACGACGGTGAACCATCAACTGATCTTTATTGCGATAACCGCATTTCAAACCGGAAATACACATTATTGAACTTTCTCCCCAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAATACTTTTTGTTAATTGCATGCCTTCAGTTGTGGCCGCTTATAACTCCAGTAAATCCCGCCAGTACATGGGGTCCGCTTATCTTCATTTTTGCCGTGTCGGCAACAAAAGAGGCATGGGATGATTACAATAGATATTTATCTGACAAAAAAGCAAATGAGAAAGAAGTTTGGGTTGTGAAGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTAATTTGGTATGGCTTAGGGAGAATGATGAAGTGCCTTCCGATCTTGTTTTGATTGGTACCTCTGATCCTCAAGGAATTTGCTATATAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCTTGCATGGGAATCGATTTTGATCTGTTAAACAAGATCAAGGGAGTTATAGAGTGTCCTAAACCAGATAAGGATATTAGAAGATTTGATGCAAACATTCGGTTATTTCCTCCTTTTATTGACAATGACGTGTGCCCTTTAACAATAAAAAACACAATTCTCCAGTCATGTTACTTGCGGAACACAGAGTGGGTCTGTGGAGTAGCCGTCTATACAGGCAATGAAACCAAGCTTGGAATGAGCCGGGGTGTCCCAGAACCAAAACTTACAGCTATGGATGCAATGATCGACAAGTTAACTGGTGCTATATTTGTATTTCAACTCGTGGTGGTTGTTGTCCTCGGTATAGCTGGTAATGTGTGGAAGGATTCTGAAGCTAGAAAGCTATGGTATGTGCAACATCCAGAGGAAGGTCCATGGTATGAGCTTTTGGTTATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATACCTATTTCAATTAAGGTGTCTCTGGATCTTGTAAAGAGCTTATATGCAAAATTTATTGATTGGGACTATGATATGATTGACTGTGAAACTGGTATTCCTTCCCATGCTACGAATACAGCAATTAGTGAGGACCTGGGACAAGTCGAATTCATTTTGACAGATAAAACCGGTACCCTCACTGAAAATAAGATGATCTTCAGGAGATGTTGTATCAGTGGCATTTTTTATGGAAATGAAAATGGAGATGCCTTGAAAGATAAAAAGTTGCTCAGTGCTATTGCAAGCAGCTCTCCGGATGTTATAAGATTTCTCACAATTATGGCAATATGTAATACAGTGGTGCCTACAAGAAGTAAAAGTGGAAATATCTTGTACAAGGCACAGTCACAGGATGAGGATGCTCTTGTGAATGCTGCTGCCTATTTGCATATGGTATTTGTCAATAAGAACGCTAATATTCTTGAAATTCAGTTTAATGGAATGCTAAATAGATATGAGCTCCTAGATACTCTGGAGTTCACATCTGAACGAAAAAGAATGTCTGTGGTCGTTAAAGATTGTCAGAATGGGAAGATTGTCCTCCTGTCAAAAGGAGCAGATGAAGCTATACTTCCTTATGCTTGTGCTGGCCAGCAAACAAGAACATTTATTGAAGCCGTGGATCAATATGCGCAACTTGGTCTCCGCACATTATGTCTGGCTTGGCGTGAACTAGAGGAAGATGAGTATCAAGAATGGGCTCTTATGTTTAAGGAGGCTAATAGCACACTGGTTGACAGGGAGTGGAGGTTAGCTGAAGTTTGTCAAAGATTAGAGCGCAATTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCTGAAACAATTGAAACATTAAGAAGAGCAGGAATAAATTTCTGGATGCTGACTGGAGACAAGCAGAACACCGCGATTCAGATAGCTCTTCTATGCAACTTTATTTCACCAGAGCCCAAAGGGCAGTTATTGTTAATTGATGGTAAAACGGAGGATGAAGTTTGTAGAAGTTTGGAGAGAGTTGTTCTGACTATGAAGACCACAACCTCAGAACCCAAGGATGTTGCTTTTGTTGTTGATGGATGGGCTCTCGAAATTGCTCTCAAGAATTATCGTAGGGCGTTCACGGAATTAGCAATACTATCAAGAACCGCAATATGTTGTCGTGTGACTCCATCGCAGAAGGCTCAGCTTGTGGAACTCTTAAAATCGTGTGATTATAGAACACTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAGCAAGCTGACATTGGAGTTGGCATTAGTGGAAGAGAAGGACTGCAGGCAGCTAGGGCAGCTGATTATAGTATTGGAAAGTTCAGGTTTCTCAAAAGATTGATTCTAGTTCACGGACGATACTCGTACAACCGTACAGCATTCTTGTCACAATATTCATTCTATAAATCCTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATATCAGGTGTCTCTGGGACCAGTCTCTTTAATTCTGTTAGCTTGATGGCGTACAATGTTTTCTACACCAGTATTCCTGTATTAGTTAGCGTCCTAGACAAAGATCTCAGTGAAGAAACGGTGATGCAACATCCTCAGATTTTATTTTACTGCCAAGCTGGGAGGATTTTAAATCCCAGCACGTTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCTGTAGTCGTGTTTGTAATTAGCATACATGCCTACGCTAATGAAAAGAGTGAAATGGTGGAGGTCTCGATGGTGGCACTATCTGGGTGCATTTGGTTACAAGCTTTTGTAGTGACTTTGGAGACCAATTCATTCACAATGTTGCAACATCTTGCTATATGGGGGAATTTAGCTGCGTTCTACGTAATCAATTGGATCTTCAGCGCCATTCCTTCATCTGGGATGTATACAATAATGTTCCGCTTATGTGGACAACCATCTTATTGGATAACCATATTTCTAATAGTAGGTGTGGGAATGGGCCCACTTTTAGCAATAAAATACTTCAGATATACATATAGACCAAGCAAAATCAACACTCTCCAACAAGCTGAACGTTTGGGTGGGCCGATTCTGTCGCTCAAAAACATTGAGCATCAGCCTCGGCCCATTGAGAAAGAAGTTTCTCCCCTCTCAATAACTCACCCCAAAAACCGAAATACAGTTTACGAACCTTTACACCGCCAAGTTATTCAAGAAATAAGGACAATTGACACTCATACTGGGGAACTAGCAGACCTTGCAAATGTTTATGAGCTATTTTGCACAATTTTCTTTCCCTTTCTTTCATAA 3315 40.63 MKRYVYINDGEPSTDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIHVGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWVCGVAVYTGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWYVQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYDMIDCETGIPSHATNTAISEDLGQVEFILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDKKLLSAIASSSPDVIRFLTIMAICNTVVPTRSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKNANILEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLLSKGADEAILPYACAGQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYQEWALMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTMLQHLAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPILSLKNIEHQPRPIEKEVSPLSITHPKNRNTVYEPLHRQVIQEIRTIDTHTGELADLANVYELFCTIFFPFLS 1104
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3620482 3630864 - CaPI482276_07g002500.1 Cam07g0250 130543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0250 1104 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Cam07g0250 1104 NCBIfam phospholipid-translocating P-type ATPase 424 1023 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cam07g0250 1104 Pfam E1-E2 ATPase 99 295 - -
Cam07g0250 1104 Pfam Cation transport ATPase (P-type) 435 533 - -
Cam07g0250 1104 SFLD p-type atpase 362 801 IPR044492 -
Cam07g0250 1104 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Cam07g0250 1104 Pfam haloacid dehalogenase-like hydrolase 591 764 - -
Cam07g0250 1104 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 1016 IPR023298 -
Cam07g0250 1104 SFLD C1.7: P-type atpase like 362 801 - -
Cam07g0250 1104 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Cam07g0250 1104 Gene3D - 448 589 IPR023299 GO:0000166(InterPro)
Cam07g0250 1104 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Cam07g0250 1104 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Cam07g0250 1104 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Cam07g0250 1104 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Cam07g0250 1104 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Cam07g0250 1104 SUPERFAMILY HAD-like 375 805 IPR036412 -
Cam07g0250 1104 FunFam Phospholipid-transporting ATPase 75 251 - -
Cam07g0250 1104 FunFam Phospholipid-transporting ATPase 602 789 - -
Cam07g0250 1104 Gene3D - 75 251 - -
Cam07g0250 1104 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 1023 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cam07g0250 1104 Gene3D - 602 790 IPR023214 -
Cam07g0250 1104 NCBIfam HAD-IC family P-type ATPase 717 834 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam07g0250 1104 FunFam Phospholipid-transporting ATPase 449 592 - -
Cam07g0250 1104 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 573 IPR023299 GO:0000166(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0250 Cam-Chr7:3620482 Cam09g0073 Cam-Chr9:1579712 1.20E-151 dispersed
Cam07g0250 Cam-Chr7:3620482 Cam04g0641 Cam-Chr4:20412835 2.00E-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0250 K01530 - csv:101210900 2072.74