Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g0257 | ATGATTTCGAGATCTTACACAAATCTTTTAGATTTGGCTTCTGGAAATTTTCCAGCAATGGAAGTGAAAAGGAAGCGATTTCCGCGAGTCATGACTGTTCCGGGTAATGTAGCTGAGCTTGATGATGATCAGGCTTACAGTGTGACATCTGAAAACCCATCGTCAATTTCCTCAGATCGGATGATAATTGTAGCAAACCAGCTACCTTTAAGAGCAAAGCGAAGGGAGGATGATAATACGTGGAGTTTCAGTTGGAATGAAGATTCGTTGCTTTTGCAGCTTAAAGATGGCTTACCCGAAGATATGGAGGTTCTTTACGTTGGTTCGCTGAAAGTCGATATCCAACCAGAAGAGCAAGATGAGGTCTCCCAGATTTTGTTGGAGAAATTTAGGTGTATTCCTACATTTTTGCCTCCTCATATTTTGGAAAAGTTTTATGATGGTTTCTGCAAGAGGCATTTGTGGCCTCTTTTTCATTATATGCTGCCATATTCTGCTGATCAGAAGGGTCGATTCGACCGCTCCATGTGGGAAGCCTATGTATCAGCAAATAAGTTATTTTTCCAGAAAGTAGTTGAGGTCATCAACCCAGATGATGACTATATCTGGATCCATGATTACCATTTGATGGTATTGCCCACTTTCTTGAGGAGGCGTTTTAACAGAGTTAAAATGGGATTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATCTACCGTACCCTTCCTGTCAGAGAAGAGATTCTCAAGGCATTACTGAACTCTGATATCATTGGATTTCACACTTTTGATTATGCTCGTCATTTCCTTTCTTGTTGTAGCCGAATGTTGGGTTTGGAATACCAGTCAAAAAGGGGATATCTTGGATTGGAATACTATGGCAGGACGATTGGGATAAAGATAATGCCTGTTGGTATTCATATGAGTCGGATTGAATCGGTGATGAAACTGGCAGATGAGGATGCTAAGACGAGGGAACTCACACAACAATTTGCAGGGAAAACGGTGTTGCTTGGTGTCGACGATTTGGACATCTTCAAAGGTATCAACTTGAAATTGTTAGCTATGGAACAGGTACTAAAGCAACATCCGAAGTGGCAGGGAAAGGCTGTACTCATCCAAATTGTAAATCCTGCCAGAGGCAAGGGAAGAGATCTACAAGAAATAGAAGATGAAATAAAAGAAAGCTGCAGAAGGATCAACAAGGAGTATGGACATCCTGGTTACGAGCCAATAGTACTTCTCGACAGGCACGTGCCAATTACTGAAAGGGTTGCTTATTATAGCATTGCTGAGTGTGTAGCTGTCACTGCTGTTAGAGATGGCATGAACCTAACTCCTTATGAGTACGTTGTCTGTAGACAGGGAATATCCACCTTCCAAAAATGTTTAAACTTCAGCGGACCAAAAAAGAGCATGCTCGTCATATCTGAATTTATTGGATGTTCTCCATCACTGAGTGGAGCATTTCGTGTCAACCCATGGAATGTTGAAAGGACAGCAGAGGCTCTGAATGAAGCAATCTCAATGTCTGATTCAGAGAAGCAGCTGCGACATGAGAAGCATTATCGTTATGTTGCTACACACGATGTGGCTTATTGGTCTCGTAGTTTCTTGCAAGATATGGAGAGAACTTGCTCAGATCATTTCAGGAGACGATGTTGGGGAATAGGTTTTAGTTTTGGATTCAGGGTTGTAGCTCTTGATCCCAATTTCAGAAAACTTTCAGTAGATGCCATTGTATCATCTTACAGTAGGGCTGAAAGTCGGGCTATTCTGTTGGACTATGATGGCACTGTGATGCCTCAAAACTCCATAAATAAGTCACCGAGTGAGCAGGTTATCTCTATCCTTAACACCCTTTGTGCAGATGCAAAAAATGTGGTCTTCATTGTGAGTGGACGAGGGAGGGACAGCTTAAGCAAGTGGTTTCGCCCATGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATTTTTTGAGGCAGTCGCAAAATGAGGAGTGGAAGATCTGCGGCCAAAGTTCTGATTTTGGATGGATGCAGATTGCCGAACCTGTTATGAAATTGTATACCGAGGCTACAGATGGTTCTTCTATTGAAAGAAAGGAAAGTGCTTTGGTCTGGCAGTATCGAGATGCAGATCCTGGTTTCGGATCATCCCAGGCAAAGGAAATGTTGGATCATTTAGAGAGTGTTTTGGCAAACGAACCTGTAGCAGTCAAAAGTGGCCAGTTTATCGTAGAAGTGAAACCACAGGGGGTTACCAAAGGGCTAGTGGCTGAAAAGATCTTTTCATCAATGGTGGAGGATGGAAAGCTTGCTGACTTTGTGTTGTGCATCGGTGACGACAGATCTGATGAGGACATGTTTGAAATAATTGGTAATGCGTTGTCCAGTAACATTCTTTCTCCAACGACATCGGTTTTTGCCTGCACTGTTGGACAGAAGCCAAGCAAAGCCAAATATTATTTAGATGACACAGCTGAAGTAATAAGTATGCTTGAATACCTGGCTGAAGCGTCTAGCCCATTGCCATCCTCGGACGATGAAGAAGGTGAAAATGCTTCTTGA | 2571 | 42.47 | MISRSYTNLLDLASGNFPAMEVKRKRFPRVMTVPGNVAELDDDQAYSVTSENPSSISSDRMIIVANQLPLRAKRREDDNTWSFSWNEDSLLLQLKDGLPEDMEVLYVGSLKVDIQPEEQDEVSQILLEKFRCIPTFLPPHILEKFYDGFCKRHLWPLFHYMLPYSADQKGRFDRSMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMSRIESVMKLADEDAKTRELTQQFAGKTVLLGVDDLDIFKGINLKLLAMEQVLKQHPKWQGKAVLIQIVNPARGKGRDLQEIEDEIKESCRRINKEYGHPGYEPIVLLDRHVPITERVAYYSIAECVAVTAVRDGMNLTPYEYVVCRQGISTFQKCLNFSGPKKSMLVISEFIGCSPSLSGAFRVNPWNVERTAEALNEAISMSDSEKQLRHEKHYRYVATHDVAYWSRSFLQDMERTCSDHFRRRCWGIGFSFGFRVVALDPNFRKLSVDAIVSSYSRAESRAILLDYDGTVMPQNSINKSPSEQVISILNTLCADAKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYFLRQSQNEEWKICGQSSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADPGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVTKGLVAEKIFSSMVEDGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPTTSVFACTVGQKPSKAKYYLDDTAEVISMLEYLAEASSPLPSSDDEEGENAS | 856 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3666560 | 3669799 | - | CaPI482276_07g002570.1 | Cam07g0257 | 130550 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g0257 | 856 | CDD | HAD_TPP | 591 | 830 | - | - | |
Cam07g0257 | 856 | NCBIfam | HAD-IIB family hydrolase | 592 | 796 | IPR006379 | - | |
Cam07g0257 | 856 | CDD | GT20_TPS | 60 | 543 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cam07g0257 | 856 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 53 | 312 | - | - | |
Cam07g0257 | 856 | Pfam | Glycosyltransferase family 20 | 60 | 543 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cam07g0257 | 856 | Gene3D | Glycogen Phosphorylase B; | 53 | 313 | - | - | |
Cam07g0257 | 856 | Pfam | Trehalose-phosphatase | 593 | 827 | IPR003337 | GO:0005992(InterPro) | |
Cam07g0257 | 856 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 60 | 546 | - | - | |
Cam07g0257 | 856 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 719 | 850 | - | - | |
Cam07g0257 | 856 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 314 | 527 | - | - | |
Cam07g0257 | 856 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 24 | 840 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER) | |
Cam07g0257 | 856 | SUPERFAMILY | HAD-like | 590 | 838 | IPR036412 | - | |
Cam07g0257 | 856 | Gene3D | - | 589 | 690 | IPR023214 | - | |
Cam07g0257 | 856 | Gene3D | - | 718 | 850 | IPR023214 | - | |
Cam07g0257 | 856 | Gene3D | Glycogen Phosphorylase B; | 314 | 527 | - | - | |
Cam07g0257 | 856 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 589 | 706 | - | - | |
Cam07g0257 | 856 | FunFam | Trehalose-6-phosphate synthase 2 | 673 | 752 | - | - | |
Cam07g0257 | 856 | NCBIfam | trehalose-phosphatase | 588 | 838 | IPR003337 | GO:0005992(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g0257 | Cam-Chr7:3666560 | Cam11g1750 | Cam-Chr11:30042654 | 4.90E-121 | dispersed | |
Cam10g0139 | Cam-Chr10:3017249 | Cam07g0257 | Cam-Chr7:3666560 | 0.00E+00 | transposed | |
Cam01g2449 | Cam-Chr1:36319697 | Cam07g0257 | Cam-Chr7:3666560 | 0.00E+00 | wgd | |
Cam03g0713 | Cam-Chr3:8015379 | Cam07g0257 | Cam-Chr7:3666560 | 8.40E-122 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g0257 | K16055 | - | csv:101209914 | 1709.5 |