Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0301 ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCTGCGGCGGTGCAGCTCTCTGGCAGTCGGAAAATGTTCTGGCGCTCGGCTTCATGGTCTGCATCACGTTCCTCACTTCACCATCCTGAAGTGAACAGAGAAGGTGGAGACCCCAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATTTTCCCTGCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAGCCTTTGTCGATTGCTCGGCGAAGCTTAGATGAATGGCCGAAGGCGGGGTCAGATGATATTGGCGAGTGGCCACAACCTCCTACTCCAAGTGGCAGAGGAAATGGTGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAATCCAGAAAAGAACTGTGGGCTGGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGTTCAAAAGTGGCGGAACATGTATATCTTGGTGGTGATGCGGTTGCTCGAGATAGGGATATACTTAAACATAATGGAATTACTCATGTGTTGAATTGTGTAGGATTCGTATGCCCGGAGTACTTCAAAGATGATTTTGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGATGTTTTTGACTACTTTGAAGATGTTAGGGAAAAAAATGGTAGGGTTTTTGTTCATTGTTGCCAAGGAGTATCACGGTCGACGTCCTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCCAGAGGTATTGCTGACCCGAACATGGGTTTTGCTTGCCAGTTATTGCAGTGCCAAAAGCGGGTCCATGCTTTTCCTCTTAGCCCAAGTTCACTGTTGAGGATGTACAGAATTGCTCCACACTCACCCTATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCGCCCTCAGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCCATATTTGTTTGGATTGGTAAAAACTGCGAAGCTATCATGGAAAGAGATGCGAGGGGAGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAACCTATTACCTTTAATGGATAAATCTAACAGTAAAGTTAATCTTGGGGAATTAAAAGTTAAGCCTTATCCAGGGGAGAGGAAAGTTGATTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATTACTGGTGGTTTCGTACCTCCATTTCCTTCATCTGAAAATGAGCATGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTGTGCTTAGGCGTAAGTTTGCCTCTGGAAATATGAAAGAGTTTGTATCAGCTCCTCGAATATCGCTTTCTAGGGTCTATTCAGACTCGTTGATGATGATGCATTTTTCTGCAAAATCTTCATCACCTTCAGCATTTTCTTTATCGTCATCATCTTCTTCTCCTATCTATCTTTCGCCGGACTCTCTCTCTTCTGATTCAAGTTCAAGTTCAAGTTCCAAATATTTTTCAGAATCTTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAGTTTCCTCATCTCTGTCTAGTTTTTCTAGCATGTCTCTTACCTCATCCAATAGTTCCTTAGAACCTATGCCCAATGGTCCAGAAACCAATGATGCAGTCCCTTTGGAATCAAGTTCTCGCCCATTCTCATTCCCATCTAAAAAGTTCTCACCTTCTCTCGCAGAACGTCGAGGTACTGCAAAATCTCTGACATTGCCTGCAATGCCTAGTAAAATCAAAGCAACAAATAGTGCCTCAAGGTTTCTCGCCACTCAAGAAGATTTAAAGAGGAAAAACAAGACTTCTTGCCCTCTTAATGTATCAATTAATATGAAAAATGGCTCAGAGCCTATGGATAGGGTTGAAAATGAACAAACAAGTTCCACTCAGAAGTTCAAGAATATTGAAAATGGAATGGACGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAAAGTTGCCGGACAATCTGCTGGTTCCTGGAAAAGCTATCCCAAACTTTTTGGAGAAGGCATGGTATCCAATGTGTCAAATGGAAAGCAAGATGATGAATTTGTGCAACCTATGGTATACTGTTGGCCGGAGTTGGAAAAGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTATCACAGGTTCATGTAAAGAGGGATAAAGACTTGGTTGATTTAGAACAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACGGAAATAGGTCTGCCAGAAAATACAGAAATTAAGATTGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGATCATCAAAGATGGACTCCCCTTACGTAATTTAGTGAGGAGACGCTTGAAAATCCAAGATCATCAAATCTTTCTTCAACTCCTCTTGGGTTCCATTTCTCTTTCCTCTCAATCTGAACCTATGTTGAAAAAGAAAATGACGTCTGCGAATGGCAAAACTGAAACCCGACAATTGGGTACCGAGGATCACATCGAATCCTATGTCCTTTCAAAAAAGAAACACGATGTAAGTTATGCAGCACTCATGGTTGTGTTTTGTGGCTTTTGA 2814 42.0 MVGSEEDSGTSGAAAVQLSGSRKMFWRSASWSASRSSLHHPEVNREGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPEKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKVNLGELKVKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSVLRRKFASGNMKEFVSAPRISLSRVYSDSLMMMHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSSMSLTSSNSSLEPMPNGPETNDAVPLESSSRPFSFPSKKFSPSLAERRGTAKSLTLPAMPSKIKATNSASRFLATQEDLKRKNKTSCPLNVSINMKNGSEPMDRVENEQTSSTQKFKNIENGMDVRVGSVASCQQETKVAGQSAGSWKSYPKLFGEGMVSNVSNGKQDDEFVQPMVYCWPELEKIAAFDTSYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLSQVHVKRDKDLVDLEQIDWVKVGQYVLTEIGLPENTEIKIVKEGEETEEFLARLIIKDGLPLRNLVRRRLKIQDHQIFLQLLLGSISLSSQSEPMLKKKMTSANGKTETRQLGTEDHIESYVLSKKKHDVSYAALMVVFCGF 937
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4050842 4055809 + CaPI482276_07g003010.1 Cam07g0301 130594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0301 937 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311(InterPro)
Cam07g0301 937 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470(InterPro)
Cam07g0301 937 PANTHER MKPA PROTEIN 16 847 - -
Cam07g0301 937 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Cam07g0301 937 MobiDBLite consensus disorder prediction 572 604 - -
Cam07g0301 937 Gene3D Severin 304 399 IPR029006 -
Cam07g0301 937 CDD DSP 154 288 - -
Cam07g0301 937 SMART VILL_6 305 399 IPR007122 GO:0051015(InterPro)
Cam07g0301 937 MobiDBLite consensus disorder prediction 100 120 - -
Cam07g0301 937 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311(InterPro)
Cam07g0301 937 SMART dsp_5 153 292 IPR020422 GO:0006470(InterPro)
Cam07g0301 937 MobiDBLite consensus disorder prediction 572 623 - -
Cam07g0301 937 Gene3D Protein tyrosine phosphatase superfamily 136 295 IPR029021 -
Cam07g0301 937 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 294 IPR029021 -
Cam07g0301 937 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0016311(InterPro)
Cam07g0301 937 MobiDBLite consensus disorder prediction 29 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2788 Cam-Chr5:35057419 Cam07g0301 Cam-Chr7:4050842 1.40E-153 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0301 - - - 0.0