Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0312 ATGGAGGGGTTTGTGAGGTTTTTGGGTTTGGCAAAGCCATATTTTGGAGTTCTTTTTATGCAATTTGGTTCGGCTGGAATGGCAATTCTTGCAAAGTTTGCTTTGAACAAAGGGATGAGCCAATATGTTTTTGTGTTTTATCGTATGATTATCGCTACTATTATTATTGCTCCTTTTGCCATCATATTTGAAAGGAAAGTGAAGACAAAGATGACCATTCCGTTGGTCTTCAAGATTGTGATGTTGGGTTTATTAGAGCCAGTGATTGATCTCAACTTATACTTTACTGGGATGAAGTATACAACAGCAACCTTTGCAGTTGCCATGTGCAATGTTCTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAGAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACCATAGTAACAGTAGGAGGAGCCATGATTATGACTTTCATTAGAGGACCCATGTTGAATCTGCCATGGACAAAAGCCAACCATCCCTCTGCTTCTTCTTCAACTGCTTCAATAAATCACCAAGACCAAATCAAGGGCTCCCTCATGATTGCAATTGGCTGCATTTGCCAGTCAGCTTTCATCATTCTTCAGGCGATTACATTGAAATTGTACCCAGCTGAGCTGTCTCTTACAGCATTGATATGCTTGGTGGCCACCATTGGAGGCTGTGTGGTTGCTTTGGTCATGGAAAGAGGGAACCCTTCTGCTTGGGCTTTGCATTTTGATAGCCAGCTTCTATCTGTGGTTTACGCTGGAGTAATATGTTCAGGGGTAACATATTATATTCAAGGAATGGTGATGCAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTGTCCATGATTTTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATTATGTTGCTGGGCAGGATTATTGGAGCAGTGACCATAATCACTGGGTTGTACCTAGTTCTGTGGGGCAAAAGAAAAGATCAACTTTCAGTTAAATCAGACTGTGATAACATAGCACATGGTAAGCAACAAATGACTGAAATAGGTGAGGCTTCGAAGACGGATCAATCGAGTCAAGAATTCGCCTCAGCTTGA 1110 41.71 MEGFVRFLGLAKPYFGVLFMQFGSAGMAILAKFALNKGMSQYVFVFYRMIIATIIIAPFAIIFERKVKTKMTIPLVFKIVMLGLLEPVIDLNLYFTGMKYTTATFAVAMCNVLPAFAFLMAWACRLERVNILKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKANHPSASSSTASINHQDQIKGSLMIAIGCICQSAFIILQAITLKLYPAELSLTALICLVATIGGCVVALVMERGNPSAWALHFDSQLLSVVYAGVICSGVTYYIQGMVMQIKGPVFVTAFNPLSMIFVAIMSSFILSEIMLLGRIIGAVTIITGLYLVLWGKRKDQLSVKSDCDNIAHGKQQMTEIGEASKTDQSSQEFASA 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4171164 4175004 - CaPI482276_07g003120.1 Cam07g0312 130605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0312 369 PANTHER WAT1-RELATED PROTEIN 18 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam07g0312 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Cam07g0312 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 331 - -
Cam07g0312 369 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Cam07g0312 369 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0312 Cam-Chr7:4171164 Cam09g2054 Cam-Chr9:35133033 4.60E-108 dispersed
Cam07g0312 Cam-Chr7:4171164 Cam07g0313 Cam-Chr7:4208202 3.40E-151 tandem
Cam07g0312 Cam-Chr7:4171164 Cam09g2052 Cam-Chr9:35074539 1.80E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0312 - - - 0.0