Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0345 ATGGCGAATCGATGGTGGGCTGAAAATATACCCACCACCACGGACAGCAGCACCAGCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCTGATGAAGAGAACAACTCGGGAAGCCATGAGAGAGCTGAACCAGGCACCAGTTCAAGCACGCGCCGCCCTCGTGGCCGGCCGCCGGGATCTAAGAACAAGCCGAAGCCACCGGTGGTTGTAACGAAGGAGAGCCCCGATGCCCTCCGGAGCCACGTTTTGGAAATAGGCAGCGGCAGTGACATCGTTGAAAGCATCTCGAACTTCGCCCAGCGCCGGCAGCGAGGAGTTTCAGTTCTTAGCGGAAATGGGGTTGTCGCCAATGTAACTCTCCGGCATCCGGCGGCCCCAGGCGGCGTTATTACACTACAAGGTCGATTTGATATACTGTCGCTCTCTGGTGCTTTTTTGCCTGCCCCAGCTCCGCCGGGTGCAACTGGGTTAACTGTCTACTTGGCTGGCGGACAGGGGCAGGTCGTTGGTGGCATTGTTGTCGGTGCACTCGTTGCAACCGGTCCAGTCATCGTCATCGCTGCCACTTTCACCAATGCAACATTCGAGCGGCTGCCGCTTGAGGACGAGGAGGTGGCTGCGGGAGACAAGTCTGGGACTAGCCAGAACAATTCAACTTCTCAGAGCATGGGGGAGCAACAGCAACAGCAGCAACAACAGCAACAGCAGCCTTCAATGGGAGTTTACAATATGGGTCCAAACTTGGTGCCAAATGGTCAGTGGTGTAGGTGGAACAAGTGGAAGTATGAGTTTGGAGCCACAATATTCTTTGATCAGGTGGTTTGA 834 54.92 MANRWWAENIPTTTDSSTSNPYSTPLKQSLEAADEENNSGSHERAEPGTSSSTRRPRGRPPGSKNKPKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPAAPGGVITLQGRFDILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGIVVGALVATGPVIVIAATFTNATFERLPLEDEEVAAGDKSGTSQNNSTSQSMGEQQQQQQQQQQQPSMGVYNMGPNLVPNGQWCRWNKWKYEFGATIFFDQVV 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4631431 4634514 - CaPI482276_07g003450.1 Cam07g0345 130638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0345 277 CDD DUF296 82 165 IPR005175 -
Cam07g0345 277 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Cam07g0345 277 MobiDBLite consensus disorder prediction 1 78 - -
Cam07g0345 277 MobiDBLite consensus disorder prediction 212 245 - -
Cam07g0345 277 FunFam AT-hook motif nuclear-localized protein 81 208 - -
Cam07g0345 277 MobiDBLite consensus disorder prediction 207 246 - -
Cam07g0345 277 MobiDBLite consensus disorder prediction 43 58 - -
Cam07g0345 277 PIRSF ESCAROLA 7 270 IPR014476 GO:0003680(InterPro)
Cam07g0345 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 256 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam07g0345 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 208 - -
Cam07g0345 277 Gene3D - 81 210 - -
Cam07g0345 277 MobiDBLite consensus disorder prediction 1 35 - -
Cam07g0345 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 194 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1751 Cam-Chr2:30595749 Cam07g0345 Cam-Chr7:4631431 8.00E-71 dispersed
Cam06g1583 Cam-Chr6:27312326 Cam07g0345 Cam-Chr7:4631431 3.90E-59 dispersed
Cam07g0345 Cam-Chr7:4631431 Cam09g1197 Cam-Chr9:13079260 7.30E-58 dispersed
Cam03g1175 Cam-Chr3:23274029 Cam07g0345 Cam-Chr7:4631431 5.40E-37 transposed
Cam11g0699 Cam-Chr11:8606729 Cam07g0345 Cam-Chr7:4631431 1.70E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0345 - - - 0.0