Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0423 ATGACGAATTTACCCTCTCCGGCCGTCGCCGTCACTGTCCTCACCCTCATCGCCGTCGTTTTCCCGTTGTTCCCGGCGATCCAAGCTCTCGGTTCAGCCTCAACCCTTGCCGTCAGCTACAGCTCCGGAACCGTCTGTGGCATCGTCGCCGAGCAGCCGACCCAAAGGATTTTGTGTTTCCGTGACGGTCAAACCATTTTTATTGAACCCCATATCTCCTTCTCCGCCGTATCCGGCGGCCGGAATACCTTCTGCGGTATAAGGTCCGGCGGTTACACCCTCCTCTGTTGGGACTTCGACTCGACCACCGCTACGTTTTCCCGGAGAAGACTTTACTACAGCCCCACCGTTCTTCTGGAGAATCTCGCGGTCGGCGACGAGCAAATCTGCGCCACGTTGGTTGGCGCCGGCAATGTAACTTGCTGGCGAGAAGGTAACAACGCGAGTGTTGGATTTTCTTCTCTTCAATATGACTCAATCTCTTCTGGGTATGGGTTTTCTTGTGGGATTTTGAAAGGGAGTCAATCCATCCGATGTTGGGGTAGAAATTCGTCGATTGCAACCGTAATCGAAAATGGGTTTCGAAATATTTCAATGTTGAGCATCGTGGCCGGTGGGTTTCATGCCTGTGGATTGAATTCCTCTGGTGGGTTGGTTTGTAAAGGGAATAACGATTTTGGGCAGTTGGATTTTCCTTCAAATACATCCATGGGGTTCTCTGAATTAGCACTCGGTGAACGCCATAGCTGTGGGATTTTAGTCTCGAATGGATCAGTGGTTTGTTGGGGCGGCTTGGGATTTTCTGTTGATCCGATTCGAGAAACTTCTTTTGAGTTAATTTCTTCAGGATCTGATTTTGTTTGTGGTTTAACAACGAGTAATTTCTCTGTTCTTTGTTGGGGGCCTGGTTGGTCCAATGATTCTTTCGGTCTTTCTTCGCTTTCTCTTCCCAAGATTCTTCCTGGTCCTTGTGTTCAATCTTCTTGTAGTGACTGTGGGGTTTATCCTTTATCTCAAACCCTCTGTTCTAATTCTGGGAATGTCTGTAATCGCTGTTTGTTTACTGCTTCAACGCCGCCATCGCCTCTGCCATCGTCTCCCCCTCCGCAGCGGTTGCCACCGCCAACGGTGAAGGCCGCGTCACCTCCGCCGGCTGCCTTGAGAAAGGGTTTGTTGGCATTTGGTATTGTGGGCTCAGTTGGTGCCTTTGCTGGGATTTGCACTATTGTTTACTGTTTGTGGACTGGTGCTTGTTTTGGGCATAAGAAGATACATAACTCTGTTCAGCCTACCATCACTAGAGCTGCTAGTTCGAATGGTGGAACGACGACTTCAAACACAAACAACAGCCCTCCGTCTCGGTCGTTGACGATACGACGTCAAGGCTCACGGATAATGCGAAGGCAGAGGAGTGGCACCTCATCTAAGCATGCCGATAGAGCAGAAGAATTCACTCTAGCAGAGCTTGCTATGGCTACCAATGATTTTTCTCCTGAGAACAAGATTGGTGAGGGGAGCTTCGGCGTCGTGTACCGAGGGAAACTGTACGATGGCCGGGAAGTTGCGATTAAGAGAGGCGAAACAGGACCTAAAACTAAGAAGTTTCAGGAGAAAGAGAGTGCTTTTGATTCAGAATTGGCATTCTTGTCTAGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTACTGTGAGGAGAAAGATGAGAGACTGTTGGTTTATGAGTATATGAAAAATGGTGCACTTTATAATCATCTTCATGACAAGAACAATTTTGAGAAAGCCAGCAGTGTTATAAACTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCTAGAGGGATTGAATATCTTCACAACTATGCAGTCCCTCCCATAATCCATAGAGATATCAAATCATCCAACATACTCCTCGACGCAAATTGGACGGCGAGAGTATCTGACTTCGGGTTGTCATTGATGAGTCCAGGGTCGGACCGTGACTACCAACCAACAAAGGCAGCTGGGACGGTTGGTTACATTGATCCTGAGTACTATGGACTGAATGTTTTGACTGCTAAGAGTGATGTGTATGGCCTTGGGGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTTAAGGATGATGAACAAGGAGGGACACCGGTCAGCGTGGTCGATTATGCGGTGCCTGTGATTATGGTTGGAGAATTGGTGAAGATTTTGGATCAGAGAGTTGGGCCACCACAGATGAACGAAGCGGAGGCGGTGGAGCTGGTGGCTTACACAGCGATGCATAGTGTGCATTTGGAAGGGAAAGATCGGCCGACGATGACCGACATTGTTGCTAATTTGGAACGAGCTTTGAATCTTTGTGATGATAGCTATGGTAGCATCTCTAGTGGTGGCATTTCCATTGTTTCAGAGTGA 2418 48.06 MTNLPSPAVAVTVLTLIAVVFPLFPAIQALGSASTLAVSYSSGTVCGIVAEQPTQRILCFRDGQTIFIEPHISFSAVSGGRNTFCGIRSGGYTLLCWDFDSTTATFSRRRLYYSPTVLLENLAVGDEQICATLVGAGNVTCWREGNNASVGFSSLQYDSISSGYGFSCGILKGSQSIRCWGRNSSIATVIENGFRNISMLSIVAGGFHACGLNSSGGLVCKGNNDFGQLDFPSNTSMGFSELALGERHSCGILVSNGSVVCWGGLGFSVDPIRETSFELISSGSDFVCGLTTSNFSVLCWGPGWSNDSFGLSSLSLPKILPGPCVQSSCSDCGVYPLSQTLCSNSGNVCNRCLFTASTPPSPLPSSPPPQRLPPPTVKAASPPPAALRKGLLAFGIVGSVGAFAGICTIVYCLWTGACFGHKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSLTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELAMATNDFSPENKIGEGSFGVVYRGKLYDGREVAIKRGETGPKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKNNFEKASSVINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMSPGSDRDYQPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTPVSVVDYAVPVIMVGELVKILDQRVGPPQMNEAEAVELVAYTAMHSVHLEGKDRPTMTDIVANLERALNLCDDSYGSISSGGISIVSE 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5699225 5701642 - CaPI482276_07g004230.1 Cam07g0423 130716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0423 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g0423 805 ProSiteProfiles Protein kinase domain profile. 496 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0423 805 Pfam Protein kinase domain 498 778 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0423 805 MobiDBLite consensus disorder prediction 435 460 - -
Cam07g0423 805 MobiDBLite consensus disorder prediction 360 381 - -
Cam07g0423 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 33 794 IPR044815 GO:0004674(InterPro)
Cam07g0423 805 SMART serkin_6 496 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0423 805 FunFam Serine/threonine-protein kinase-like protein CCR4 577 797 - -
Cam07g0423 805 MobiDBLite consensus disorder prediction 359 381 - -
Cam07g0423 805 Gene3D - 65 315 IPR009091 -
Cam07g0423 805 FunFam serine/threonine-protein kinase-like protein CCR1 465 576 - -
Cam07g0423 805 Pfam Regulator of chromosome condensation (RCC1) repeat 201 228 - -
Cam07g0423 805 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524(InterPro)
Cam07g0423 805 SUPERFAMILY RCC1/BLIP-II 65 263 IPR009091 -
Cam07g0423 805 Gene3D Phosphorylase Kinase; domain 1 458 576 - -
Cam07g0423 805 SUPERFAMILY Protein kinase-like (PK-like) 477 781 IPR011009 -
Cam07g0423 805 Gene3D Transferase(Phosphotransferase) domain 1 577 793 - -
Cam07g0423 805 MobiDBLite consensus disorder prediction 435 479 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0071 Cam-Chr3:1688803 Cam07g0423 Cam-Chr7:5699225 1.00E-186 dispersed
Cam07g0423 Cam-Chr7:5699225 Cam08g0694 Cam-Chr8:5472415 5.90E-100 dispersed
Cam07g0423 Cam-Chr7:5699225 Cam07g0268 Cam-Chr7:3768145 6.20E-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85299 PF00069 Pkinase 1.30E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0423 - - - 0.0