Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0425 ATGGCTTCAATCTCTTCCAGCCCTCGTTCCGTTGAAGACATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTCGATGAGTTCTACTCGCTTTGCGATCCTGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAACCCGCGTTGGGGATCAATTTTGCAAGAGATGGGATGAAGCGTAGAGACTGGCTTTCGTTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGTAATGAGCGGTCCGTTTTACCTGAGTTTGATCTCTTATTCTGTTGTGGTATACTGTCAGTTGGGAAAGTGGAAAAGTCCAAAGTCTTCTATCAGATTGAGGAATTTTCACTTGCTTCTTGTGCTTCTTCCCCCTTGAATATCTCTTATGACCTTTTACTTTTGGAATCATCTCCTGAAGGTGTTGCCGACTATCTGTTTCTTTAG 546 46.7 MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVLPEFDLLFCCGILSVGKVEKSKVFYQIEEFSLASCASSPLNISYDLLLLESSPEGVADYLFL 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5746385 5749843 + CaPI482276_07g004250.1 Cam07g0425 130718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0425 181 PANTHER CPG BINDING PROTEIN 7 120 IPR045104 GO:0000976(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0042393(InterPro)
Cam07g0425 181 Pfam Alfin 10 120 IPR021998 GO:0006355(InterPro)|GO:0042393(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0425 Cam-Chr7:5746385 Cam11g0168 Cam-Chr11:3264846 1.00E-47 dispersed
Cam10g2172 Cam-Chr10:35194335 Cam07g0425 Cam-Chr7:5746385 2.30E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0425 K26274 - csv:101211934 245.743