Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam07g0443 | ATGTTCGCAGTTGCAGTGCCGAAGACGACGATGACTCCGTTATTCTCATCTCCAAAGCTCCCTTCACTACTCTACAAGTCCTCCTCTCTCAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCATCGCCGAGATCGTTGTCCAGTCCGAGGAATCTTCATGTTTCTGCATCGTCGTCGCCGTCGTCTATTGATACGGTTTTGAAGAGGAAGAGGCCGGCGAGAATCGACGTGCCGCCGAGTATGCCGTCGATTGGATTTGAATTTGGAATATTCGAGACGCCGGAGGTGATGGAGGAGGAAGGAGAAGGATATTCTGTTTATTGTAAAAGAGGAAGAAGACGGATCAGCGCTATGGAGGATCGATTCTCAGCTACCGTCGGAATTCAAGGAGATTCTCGCCAGGCTTTCTTCGGAGTTTTCGACGGACACGGCGGAGCAAAAGTGGCGGAAATCGCAGCAAAAAGAATGAGCGAGAATGTAATCGATCAAGTAACGAGAAGAACAGAGTCGGAACTGGAGGAAGCAATCAAAGACGGCTATCTGACGACGGATCGGGAAGTATCGGAGGAAGGCGTGAGCGGCGGCGGAGCTTGTTGCGTGACTGCATTGATACGGAACGGAAATCTGGCAGTCTCCAACGTTGGCGATTGTCGTGCTGTGTTGAGCAGAAAGGGAAAAGCGGAAGCCCTAACTTCGGATCACAGGGCGTGCAGAGAAGACGAGAGAAATCGGATCGAAAAATCGGGAGGTTATGTAGATTGTTGCGGTGGTGGATGGAGAGTTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGACGAGCATCTGAAACAGTGGGTGATATCGGAGCCGGAGACGAGAGTGATGAAGATCGAGGATGATTGTCATTTCTTGATCCTTGCTTCTGATGGTCTTTGGGACAAGGTTACAAATCAGGAAGCAGTAGACAGAGTAGAGGCAGTATGCGGCGTAGAGATAATGAAGAAGAAACCAAATCCGGCATTAATAATGTCGGCCTGCAAACAGTTGGCGACTTTGTCAACATCAAGAGGCTCAATCGACGATACCACTGTTATGATCATCAAACTAAATTCCCTTTTTCATTCCTCAACCTCAATTAATCATCATCATTAA | 1140 | 48.16 | MFAVAVPKTTMTPLFSSPKLPSLLYKSSSLNSSSSSSSSSSSSSPRSLSSPRNLHVSASSSPSSIDTVLKRKRPARIDVPPSMPSIGFEFGIFETPEVMEEEGEGYSVYCKRGRRRISAMEDRFSATVGIQGDSRQAFFGVFDGHGGAKVAEIAAKRMSENVIDQVTRRTESELEEAIKDGYLTTDREVSEEGVSGGGACCVTALIRNGNLAVSNVGDCRAVLSRKGKAEALTSDHRACREDERNRIEKSGGYVDCCGGGWRVQGTLAVSRAIGDEHLKQWVISEPETRVMKIEDDCHFLILASDGLWDKVTNQEAVDRVEAVCGVEIMKKKPNPALIMSACKQLATLSTSRGSIDDTTVMIIKLNSLFHSSTSINHHH | 379 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6121747 | 6123767 | + | CaPI482276_07g004430.1 | Cam07g0443 | 130736 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam07g0443 | 379 | CDD | PP2Cc | 105 | 365 | IPR001932 | - | |
Cam07g0443 | 379 | MobiDBLite | consensus disorder prediction | 26 | 76 | - | - | |
Cam07g0443 | 379 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cam07g0443 | 379 | SMART | PP2C_4 | 98 | 363 | IPR001932 | - | |
Cam07g0443 | 379 | SMART | PP2C_SIG_2 | 125 | 365 | IPR001932 | - | |
Cam07g0443 | 379 | Pfam | Protein phosphatase 2C | 115 | 356 | IPR001932 | - | |
Cam07g0443 | 379 | ProSitePatterns | PPM-type phosphatase domain signature. | 138 | 146 | IPR000222 | GO:0043169(InterPro) | |
Cam07g0443 | 379 | ProSiteProfiles | PPM-type phosphatase domain profile. | 105 | 365 | IPR001932 | - | |
Cam07g0443 | 379 | Gene3D | - | 99 | 371 | IPR036457 | - | |
Cam07g0443 | 379 | MobiDBLite | consensus disorder prediction | 26 | 67 | - | - | |
Cam07g0443 | 379 | SUPERFAMILY | PP2C-like | 105 | 367 | IPR036457 | - | |
Cam07g0443 | 379 | PANTHER | PROTEIN PHOSPHATASE | 96 | 363 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g0062 | Cam-Chr3:1570863 | Cam07g0443 | Cam-Chr7:6121747 | 1.50E-93 | dispersed | |
Cam07g0443 | Cam-Chr7:6121747 | Cam11g0846 | Cam-Chr11:11170124 | 2.50E-69 | dispersed | |
Cam07g0443 | Cam-Chr7:6121747 | Cam05g1043 | Cam-Chr5:9434930 | 2.60E-37 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam07g0443 | K17506 | - | csv:101208170 | 553.903 |