Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0443 ATGTTCGCAGTTGCAGTGCCGAAGACGACGATGACTCCGTTATTCTCATCTCCAAAGCTCCCTTCACTACTCTACAAGTCCTCCTCTCTCAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCATCGCCGAGATCGTTGTCCAGTCCGAGGAATCTTCATGTTTCTGCATCGTCGTCGCCGTCGTCTATTGATACGGTTTTGAAGAGGAAGAGGCCGGCGAGAATCGACGTGCCGCCGAGTATGCCGTCGATTGGATTTGAATTTGGAATATTCGAGACGCCGGAGGTGATGGAGGAGGAAGGAGAAGGATATTCTGTTTATTGTAAAAGAGGAAGAAGACGGATCAGCGCTATGGAGGATCGATTCTCAGCTACCGTCGGAATTCAAGGAGATTCTCGCCAGGCTTTCTTCGGAGTTTTCGACGGACACGGCGGAGCAAAAGTGGCGGAAATCGCAGCAAAAAGAATGAGCGAGAATGTAATCGATCAAGTAACGAGAAGAACAGAGTCGGAACTGGAGGAAGCAATCAAAGACGGCTATCTGACGACGGATCGGGAAGTATCGGAGGAAGGCGTGAGCGGCGGCGGAGCTTGTTGCGTGACTGCATTGATACGGAACGGAAATCTGGCAGTCTCCAACGTTGGCGATTGTCGTGCTGTGTTGAGCAGAAAGGGAAAAGCGGAAGCCCTAACTTCGGATCACAGGGCGTGCAGAGAAGACGAGAGAAATCGGATCGAAAAATCGGGAGGTTATGTAGATTGTTGCGGTGGTGGATGGAGAGTTCAAGGAACACTGGCTGTATCTCGAGCCATTGGAGACGAGCATCTGAAACAGTGGGTGATATCGGAGCCGGAGACGAGAGTGATGAAGATCGAGGATGATTGTCATTTCTTGATCCTTGCTTCTGATGGTCTTTGGGACAAGGTTACAAATCAGGAAGCAGTAGACAGAGTAGAGGCAGTATGCGGCGTAGAGATAATGAAGAAGAAACCAAATCCGGCATTAATAATGTCGGCCTGCAAACAGTTGGCGACTTTGTCAACATCAAGAGGCTCAATCGACGATACCACTGTTATGATCATCAAACTAAATTCCCTTTTTCATTCCTCAACCTCAATTAATCATCATCATTAA 1140 48.16 MFAVAVPKTTMTPLFSSPKLPSLLYKSSSLNSSSSSSSSSSSSSPRSLSSPRNLHVSASSSPSSIDTVLKRKRPARIDVPPSMPSIGFEFGIFETPEVMEEEGEGYSVYCKRGRRRISAMEDRFSATVGIQGDSRQAFFGVFDGHGGAKVAEIAAKRMSENVIDQVTRRTESELEEAIKDGYLTTDREVSEEGVSGGGACCVTALIRNGNLAVSNVGDCRAVLSRKGKAEALTSDHRACREDERNRIEKSGGYVDCCGGGWRVQGTLAVSRAIGDEHLKQWVISEPETRVMKIEDDCHFLILASDGLWDKVTNQEAVDRVEAVCGVEIMKKKPNPALIMSACKQLATLSTSRGSIDDTTVMIIKLNSLFHSSTSINHHH 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6121747 6123767 + CaPI482276_07g004430.1 Cam07g0443 130736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0443 379 CDD PP2Cc 105 365 IPR001932 -
Cam07g0443 379 MobiDBLite consensus disorder prediction 26 76 - -
Cam07g0443 379 MobiDBLite consensus disorder prediction 1 20 - -
Cam07g0443 379 SMART PP2C_4 98 363 IPR001932 -
Cam07g0443 379 SMART PP2C_SIG_2 125 365 IPR001932 -
Cam07g0443 379 Pfam Protein phosphatase 2C 115 356 IPR001932 -
Cam07g0443 379 ProSitePatterns PPM-type phosphatase domain signature. 138 146 IPR000222 GO:0043169(InterPro)
Cam07g0443 379 ProSiteProfiles PPM-type phosphatase domain profile. 105 365 IPR001932 -
Cam07g0443 379 Gene3D - 99 371 IPR036457 -
Cam07g0443 379 MobiDBLite consensus disorder prediction 26 67 - -
Cam07g0443 379 SUPERFAMILY PP2C-like 105 367 IPR036457 -
Cam07g0443 379 PANTHER PROTEIN PHOSPHATASE 96 363 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0062 Cam-Chr3:1570863 Cam07g0443 Cam-Chr7:6121747 1.50E-93 dispersed
Cam07g0443 Cam-Chr7:6121747 Cam11g0846 Cam-Chr11:11170124 2.50E-69 dispersed
Cam07g0443 Cam-Chr7:6121747 Cam05g1043 Cam-Chr5:9434930 2.60E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0443 K17506 - csv:101208170 553.903