Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0466 ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCCTCCTCTCTTCTATTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA 501 47.7 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPNCPQIHSDDKPSSLLFPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6456415 6457368 + CaPI482276_07g004660.1 Cam07g0466 130759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0466 166 Coils Coil 85 105 - -
Cam07g0466 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Cam07g0466 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 115 - -
Cam07g0466 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0918 Cam-Chr1:11049670 Cam07g0466 Cam-Chr7:6456415 4.00E-46 dispersed
Cam02g1919 Cam-Chr2:32276117 Cam07g0466 Cam-Chr7:6456415 2.60E-45 dispersed
Cam07g0466 Cam-Chr7:6456415 Cam09g2292 Cam-Chr9:37390670 2.70E-39 dispersed
Cam05g0935 Cam-Chr5:8454470 Cam07g0466 Cam-Chr7:6456415 2.40E-31 transposed
Cam11g0632 Cam-Chr11:7851178 Cam07g0466 Cam-Chr7:6456415 1.70E-33 wgd
Cam02g2000 Cam-Chr2:33053154 Cam07g0466 Cam-Chr7:6456415 1.20E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52255 PF03195 LOB 3.70E-42 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0466 - - - 0.0