Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0499 ATGTCCAAAGAAAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCATCCCCAGCAAATTATGGGGAGAAGAACCTCATTGCAAGCTCCTCCTGGGACACTTAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCATACTTCTCCCCTCATGAGCCTCATAAATTTGCCTCTGTCCACAAGGTTTTCGGCGCTAGCAACGTCTCCAAGATGCTCATGGAAGTTTCGGAGAATCAGAGAGCGGATGCTGCGAATAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGCTGTATGGGCGCCATTTCAGCCCTACAACACCAAATTCAAGCCTTACAAGCTGAGCTCAATGCAGTGAGAGCTGAGATTTTAAGACACAAATTTAGAGAAGCTAATAATATGATTCACTCTTCTCCTCAACAACAACATTTGCCTTTTCTTTCTTCTTCTACGGAGGTCGTTTCGGTCGCCGTGCCACCACCACCTCCGCCACCACCGCTACCTCCACCGCCTCATCATGATGCTTCTTCTTCTACTTCCTCCTTGTACAACCGACCGGTGGTGGCCGTGGCGGCTGATTATAGTACTATTTCAAGTGATGAAAATGTTACCTACTTTGTTACTACTTCTAGTACTGCTCATCAATTGAATTCTTAG 735 45.17 MSKERERFDEIAKKIKRETDVSSNIHPQQIMGRRTSLQAPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRHKFREANNMIHSSPQQQHLPFLSSSTEVVSVAVPPPPPPPPLPPPPHHDASSSTSSLYNRPVVAVAADYSTISSDENVTYFVTTSSTAHQLNS 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7063589 7064845 - CaPI482276_07g004990.1 Cam07g0499 130792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0499 244 Pfam Lateral organ boundaries (LOB) domain 49 146 IPR004883 -
Cam07g0499 244 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Cam07g0499 244 MobiDBLite consensus disorder prediction 182 199 - -
Cam07g0499 244 MobiDBLite consensus disorder prediction 177 207 - -
Cam07g0499 244 Coils Coil 128 155 - -
Cam07g0499 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0499 Cam-Chr7:7063589 Cam10g1288 Cam-Chr10:26329080 5.50E-33 dispersed
Cam11g0603 Cam-Chr11:7578519 Cam07g0499 Cam-Chr7:7063589 4.00E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52257 PF03195 LOB 2.20E-40 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0499 - - - 0.0