Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0518 ATGGAACTCCCCAATTCCACTAATCAAATGGCTTCCTCTTCCAACCCCACCACCCCATTTCGCGGTTCCTTCCACCGTCGAGCCCATTCCGAGGTCCATTTCCGGATTCCCGATGATCTCGATCTTGTCTCCGACCCTTTCGACGCCCCTTCTTCTGGATTTGGAGATCTGGGCTTCGAGGATGATCTCTTGTGCACTTTCATGGACATCGAGAAGATCGGATCCAAAATCGACAATGGGTCTTCGTCGAATCCTGAAGTGGCTGGCGGCGGTACTGCGGCGGAGAATGTTGAAGGGGAGAAAATCTCCCGCCCCAGGCACCGTCATAGCAATTCTGCTGATGGGTCTTCTATTATGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCTGAGTTGTGGACAATTGATCCTAAACGTGCCAAAAGGATTTTGGCAAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGAAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCGACAACGCTCTCTGCACAGCTCACGTTGTACCAGAGAGATACCACGGGGCTTTCAACAGAAAACTCAGAGCTCAAACTTCGTTTACAAGCTATGGAACAGCAAGCTCATCTTCGCGATGCTCTAAATGAAGCTTTGAAAAAGGAAGTCGAGCGGCTCAAGATTGCAACTGGAGAAGTAATGACAGCTACAGATTCGTATAACTTTGGAATGTCGCAAGTTTCATATCCCCAATCTTGCTTCTCACACCAACCACAACCTGGGCGACACAACCCACAGAGGACGACGCAAGGGCCCCAAGTTCATCCATTCCATTCTAGTTTACCAAACCCACATCAGGCTTTGTTTGTTGCATCGCACCAGCCTCACGCCTTGACAGAAATGTTTCATCAAGATCCTATTAGCCGATTGCAGGGTCTCGACATCAGTAGCAGAGGCACAGAAATAAAGCCAGAAGGCTCCTCTATATCCGTCAGTGAAAGTAGCAGCACATTTTGA 1032 48.64 MELPNSTNQMASSSNPTTPFRGSFHRRAHSEVHFRIPDDLDLVSDPFDAPSSGFGDLGFEDDLLCTFMDIEKIGSKIDNGSSSNPEVAGGGTAAENVEGEKISRPRHRHSNSADGSSIMESIEAKKAMDPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIMELERKVQSLQTEATTLSAQLTLYQRDTTGLSTENSELKLRLQAMEQQAHLRDALNEALKKEVERLKIATGEVMTATDSYNFGMSQVSYPQSCFSHQPQPGRHNPQRTTQGPQVHPFHSSLPNPHQALFVASHQPHALTEMFHQDPISRLQGLDISSRGTEIKPEGSSISVSESSSTF 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7480326 7485957 - CaPI482276_07g005180.1 Cam07g0518 130811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0518 343 MobiDBLite consensus disorder prediction 1 21 - -
Cam07g0518 343 Coils Coil 158 185 - -
Cam07g0518 343 MobiDBLite consensus disorder prediction 323 343 - -
Cam07g0518 343 SUPERFAMILY Leucine zipper domain 142 193 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0518 343 MobiDBLite consensus disorder prediction 99 113 - -
Cam07g0518 343 MobiDBLite consensus disorder prediction 257 279 - -
Cam07g0518 343 Pfam bZIP transcription factor 142 196 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0518 343 FunFam probable transcription factor PosF21 141 194 - -
Cam07g0518 343 Gene3D - 141 192 - -
Cam07g0518 343 Coils Coil 217 237 - -
Cam07g0518 343 CDD bZIP_plant_RF2 143 192 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0518 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 140 203 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0518 343 MobiDBLite consensus disorder prediction 78 115 - -
Cam07g0518 343 SMART brlzneu 138 202 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam07g0518 343 MobiDBLite consensus disorder prediction 1 23 - -
Cam07g0518 343 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 11 291 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1969 Cam-Chr2:32820064 Cam07g0518 Cam-Chr7:7480326 8.40E-76 dispersed
Cam05g0849 Cam-Chr5:7547615 Cam07g0518 Cam-Chr7:7480326 2.90E-50 dispersed
Cam05g0852 Cam-Chr5:7584402 Cam07g0518 Cam-Chr7:7480326 4.20E-41 dispersed
Cam07g0518 Cam-Chr7:7480326 Cam08g1132 Cam-Chr8:17661171 1.10E-50 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52258 PF00170 bZIP_1 1.80E-08 CL0018 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0518 - - - 0.0