Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0521 ATGTCCTCCGAAGACATCAATGGCCTCAACTCCCAGCTCGTCTTCCAAGACGAAGCCCTCCCCTTCAATTGCTCCACCACGCCGCAGCGTCGCGTCCCCGACCCAGGTCCCAAAACCCGCGAACTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGGCGTGGACCGAGACCGATTCTTTTCCCACCAGGGTGAAGATTTCCGCCGCAGTGTTTTCGGTAACACCCGGAATTGGAATGGGAATGGGACTGCGAGAACTGGAAGTGGGAAAGGATCGGATGAGGATGATGATGATGACGACGATGATGAAGATGAAGTCGATGATGGTGATGATGATGTTGAGGGGCTTGTTTCTTTGGATGATGTCAATAAGTGTACTAAAACTTCTATCCCCAACGATGGCAACAATGATAGAAGCGATCAGAGTAGTGAGGGCTTGAAGAATGGGACCAACAAATTGGGAAATGGGAAGCTTAAGCACCATTCTTCTTTTGGTGGAACTCTGTTAGTCAAGGATGGTTTAGTTGGCTCTTCAGGCAACAACACAGGAGCAACTCAGAGTGAGAACCATCCGCAGGGAAGGTTGGGGAACTACCCAAATGCTGTTACAATTGCAGAACCTGAAAGTGATGCTTATTATTCCCAGTATTTGCAAAGCACTGAAGTGTCTGCTTCTGGGCAGAAGGATTTGGGTATGGAAAATGGATGTGGTTTTGGGAGAAGGGATGTGTCGTTTTCAGGAGAGCCTGGAGAGTCTCTGAGAGCAATTCTCACTGACCCTGTGACGGGCGCTCTCATGGACGATGCAATGATATTGCCGTGTGGACATTCCTTTGGGAGTGGTGGAATACAACATGTTCTTAGAGTAAAATCTTGTTACTCATGCTCTCAGTCAGTTTCTGAAGACTCTATTGCTCAAAACTTATCTCTTCAAGCTGCAGTCCAAGCATTCCGCCGGGAAGAAGAATTAATATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTTGACTCTCATGGATACCACAAGAGGTCGAGGTGTTCAGTTTCCTTTCGCAGTGACTGATAGGGTAATTATCAAGGGGAACAAGAGGACACCGCAACGTTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTATGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAGTACCGCTCACTTGCGAAGGTTCCAAATGATGCAACATCAAAGACGATAACAAGGAAGATCACACCAAATTGGCTTTAG 1305 47.59 MSSEDINGLNSQLVFQDEALPFNCSTTPQRRVPDPGPKTRELCGFMDDKLFPGVDRDRFFSHQGEDFRRSVFGNTRNWNGNGTARTGSGKGSDEDDDDDDDDEDEVDDGDDDVEGLVSLDDVNKCTKTSIPNDGNNDRSDQSSEGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGSSGNNTGATQSENHPQGRLGNYPNAVTIAEPESDAYYSQYLQSTEVSASGQKDLGMENGCGFGRRDVSFSGEPGESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQSVSEDSIAQNLSLQAAVQAFRREEELIFYRSPKRRRERFEQDKGGYGDLTLMDTTRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDATSKTITRKITPNWL 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7594210 7598372 - CaPI482276_07g005210.1 Cam07g0521 130814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0521 434 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 8 425 - -
Cam07g0521 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 323 IPR013083 -
Cam07g0521 434 ProSiteProfiles U-box domain profile. 252 324 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cam07g0521 434 SUPERFAMILY RING/U-box 252 324 - -
Cam07g0521 434 MobiDBLite consensus disorder prediction 175 195 - -
Cam07g0521 434 MobiDBLite consensus disorder prediction 71 159 - -
Cam07g0521 434 MobiDBLite consensus disorder prediction 122 150 - -
Cam07g0521 434 MobiDBLite consensus disorder prediction 93 116 - -
Cam07g0521 434 MobiDBLite consensus disorder prediction 71 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0521 Cam-Chr7:7594210 Cam11g0127 Cam-Chr11:2899994 4.20E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0521 - - - 0.0