Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0526 ATGGAGGCTTCTTCTTCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGGTCAAAGGTGAACATGATCATCACAGATTATTGCATGCCGGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA 474 39.45 MEASSSSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHSNLECSNRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7670226 7672382 + CaPI482276_07g005260.1 Cam07g0526 130819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0526 157 MobiDBLite consensus disorder prediction 1 26 - -
Cam07g0526 157 SMART REC_2 24 152 IPR001789 GO:0000160(InterPro)
Cam07g0526 157 Pfam Response regulator receiver domain 26 150 IPR001789 GO:0000160(InterPro)
Cam07g0526 157 Gene3D - 20 157 - -
Cam07g0526 157 ProSiteProfiles Response regulatory domain profile. 25 156 IPR001789 GO:0000160(InterPro)
Cam07g0526 157 SUPERFAMILY CheY-like 22 151 IPR011006 -
Cam07g0526 157 MobiDBLite consensus disorder prediction 1 25 - -
Cam07g0526 157 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 152 IPR045279 GO:0009736(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0526 Cam-Chr7:7670226 Cam10g1583 Cam-Chr10:29562291 5.10E-40 dispersed
Cam07g0526 Cam-Chr7:7670226 Cam06g1813 Cam-Chr6:29205961 2.50E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52259 PF00072 Response_reg 1.10E-21 CL0304 Cam TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0526 K14492 - csv:101208898 248.825