Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0541 ATGGAGGGATCTATAATCGGTGGTTTCGTGTCGGTTTTTCCGGTGGCGGTTGCGGTGACGGTAGTGGCGATATTGGTCCATTTGTACTTTTACGGGGCGTGGAGGAGGACGGCGGAGGTAAGGAGGAAGTTGAGAGCACAAGGTGTGATAGGGCCGCCGCCGTCGGTTCTGTATGGTAACTTGCCGGAGATGCAGAAGATTCAGTTGCAGACGGCAGCTATGGCTTCTCCGCCGCATGGTGCATCGGCGATTATCGCTCATGATTATACATCCACTCTCTTTCCCTATTTTGTCGAGTGGAGGAAGCAATACGGGCCATTATACACGTACTCGACAGGGATGAGGCAGCATCTGTACGCCAACAAGGTGGAGCTTGTCAAGGACTTGAACTTTTCCAACAATATCAACTTGGGGAAGCCCTTCTATGTCACCAAAAAGCTTGCTCCCATTCTTGGCCACAGCGTGGTTCGCTCGAATGGCGCCGTTTGGGCAGTGCAACGTAAGATCATTGCCCCTGAGTTCTTCATGGACCGTGTTCGGGCCATGGTGGGGCTCATGGCCGACGCAGCATTGTGTCTGATCGACAAATGGGAGAGCAGAATCGGAGACGGAGCAACCGCCGAGATTGAGGTTGATGAAGATCTAAGAGGGTTCTCGGCGGATGTCATTTCTAGAGCTTGCTTTGGGAGTTGGTATGAGAAGGGGAAGGAGATTTTCTCCAAGCTTAGGGATCTTCAGCGGTTGGTTAGCGAGGGGAGCTTTCTGTTTGGTTACATTTCTTTGAGTGATAGATTTTTTCAACGAAGCAAACACAGAAGAATAAAAAAGCTGGAGAAAGAGATTGAGTCATTAATATGGGAGACGGTTCAACAACGCCAAAAAGAGTGCTCTAAAACCTCCTCGTCGGAGAAGGATCTATTACAACTGATAATGGAGGCCACCACCAATGACCCAAATATAGGAGCCAATGACTCTTCCAAAAACTTCATTGTTGACAACTGCAAGAGCATCTACTTTGCGGGCCATGAGTCCACCGCCGTCGCCGCCACTTGGTCCTTGATGCTCCTCGCCCTCCATCCTGAATGGCAAGATTGTATCCGATCCGAGTTTGCTCACGCTTGCCCTGACGGTCACCCCGACATGGCCGTGATTTCTCAACTCAAATCGGTAAGTATGGTGGTCCATGAAACATTGCGTTTATACCCTCCAGCAGCATTTGTGGCGAGGGAGACATTTGCCGAGATGCAACTTGGGAACGTGGTGGTTCCAAAGGGCGTTTGCTTGTGGACTTTGATTCCGTCGCTACACAGAGAAGTCGAAATATGGGGAGAAGATGCGAATAAGTTCAAGCCAGAGCGATTCGAAAATGGCATAGCCAAGGCGTGCAAGTTCCCTCAGGCCTACGTGCCATTCGGGGCGGGTCCTAGACTATGCTTGGGGAAGAACTTTGCATTAGTTGAGTTGAAGATCATAATTTCTCTTGTAGTATCCAAGTTTAGATTCTCGTTGTCTCCTGAGTATCGCCATTGTCCTTCTTATAGAATGATTGTGGAGCCTGCAAATGGAGTAAAAATTGTTTTCCAAAGGCTTTGA 1593 49.34 MEGSIIGGFVSVFPVAVAVTVVAILVHLYFYGAWRRTAEVRRKLRAQGVIGPPPSVLYGNLPEMQKIQLQTAAMASPPHGASAIIAHDYTSTLFPYFVEWRKQYGPLYTYSTGMRQHLYANKVELVKDLNFSNNINLGKPFYVTKKLAPILGHSVVRSNGAVWAVQRKIIAPEFFMDRVRAMVGLMADAALCLIDKWESRIGDGATAEIEVDEDLRGFSADVISRACFGSWYEKGKEIFSKLRDLQRLVSEGSFLFGYISLSDRFFQRSKHRRIKKLEKEIESLIWETVQQRQKECSKTSSSEKDLLQLIMEATTNDPNIGANDSSKNFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQDCIRSEFAHACPDGHPDMAVISQLKSVSMVVHETLRLYPPAAFVARETFAEMQLGNVVVPKGVCLWTLIPSLHREVEIWGEDANKFKPERFENGIAKACKFPQAYVPFGAGPRLCLGKNFALVELKIIISLVVSKFRFSLSPEYRHCPSYRMIVEPANGVKIVFQRL 530
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 7909670 7914014 + CaPI482276_07g005410.1 Cam07g0541 130834
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0541 530 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 Coils Coil 274 294 - -
Cam07g0541 530 Gene3D Cytochrome P450 33 530 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 Pfam Cytochrome P450 92 524 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 522 IPR050665 GO:0004497(PANTHER)
Cam07g0541 530 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 SUPERFAMILY Cytochrome P450 88 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam07g0541 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0541 Cam-Chr7:7909670 Cam10g1169 Cam-Chr10:24927081 1.70E-79 dispersed
Cam06g0817 Cam-Chr6:11263698 Cam07g0541 Cam-Chr7:7909670 5.70E-117 transposed
Cam06g0965 Cam-Chr6:14639527 Cam07g0541 Cam-Chr7:7909670 8.80E-09 transposed
Cam11g0572 Cam-Chr11:7240175 Cam07g0541 Cam-Chr7:7909670 1.40E-89 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0541 K20661 - csv:101216582 922.924