Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0598 ATGACGAAGTCCAAGAGTTTTATACACAACCTCATCAGACCATTCAGATTCGGTTCCTCAAGAGATAGGCAGGGCGAGGATGATTTGGAGGAGATTGCTGCTAAGGAACAGAAGGTTATTCAGTTCGAAATCTTAGTTGAAGCTACCAATAATTTCCACCAGAATAACAAGCTTGGCCAAGGCGGATTTGGTCCAGTTTTCAAGGGGAAGTTAAAGGATGGAAGAGTTATTGCAGTTAAGAAGTTGTCGCATTATTCAAAACAAGGGAGAAAGGAGTTTATGACTGAAGCTAAATTGTTGGCTCGTGTGCAGCACAGAAATGTTGTCAATCTGTTGGGATACTGTGTGCATGGTTCAGAGAAACTACTGGTTTACGAATACGTCACGAATGAGAGCCTTGACAAGCTTCTATTTAAATCCAGCAGACGAGGAGAACTTGATTGGAAGAGGAGGTATGACATAATCTTTGGCATCGCACGAGGGTTGCAATATCTTCATGTCGACTCACATAATGTCATTATCCATCGTGACATAAAGGCTAGTAACATTCTGTTGGATGATAAATGGGTCCCTAAGATTGCAGATTTTGGCATGGCTCGCCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGTGTTGCTGGTACAAACGGATATATGGCTCCCGAATATGTGATGCACGGACATCTATCAGCAAAGGCAGATGTTTTTAGCTTTGGTGTTTTGGTTTTGGAACTTATAAGCGGCCAGCGAAATTCGTCATTTAGTTCATTTATGGATGCCGAGAATCTACTTGATTGGGCTTACAAGCTATACAAGAAGGGCAGGAGCTTGGAAATCATGGACCCAACATTAGCATCATCAGCTGTTCCTGACCAAGTTACAATGTGCATTCAGATAGGATTGCTCTGCACACAAGGCGATCCGCATCTACGGCCAGCCATGCCACGTGTAGTTTTAATCCTTTCAAAGAGACATGGTAATTTGGACGAACCAACAAGACCAGGAATACCCGGGTCTCGGTATAGAAGATCTCGTAGGACAAGTGCATCGTCCTCCAACGCTGGTACTTCAGGAACTTCTGGTGCATCCGACTCCTATGCTATGACGAGCAATACTACTGGAACTATAACTGCTACCGCAACGGCAACAGCAACAGCAAACGAACTTGCTTCTGGTTCTTCTCCAGTTAGTCGAGTATCTGCAACAGCAAATGAAGTTGCTTCTGGTTCTTCTTCAGTTAGTCAAGGATACGATACTCGTGGGAAACGTCCGATAGAAGGTGATGAGTTTGAATTTGTCCTAATGTAA 1311 43.63 MTKSKSFIHNLIRPFRFGSSRDRQGEDDLEEIAAKEQKVIQFEILVEATNNFHQNNKLGQGGFGPVFKGKLKDGRVIAVKKLSHYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVTNESLDKLLFKSSRRGELDWKRRYDIIFGIARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKADVFSFGVLVLELISGQRNSSFSSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDPHLRPAMPRVVLILSKRHGNLDEPTRPGIPGSRYRRSRRTSASSSNAGTSGTSGASDSYAMTSNTTGTITATATATATANELASGSSPVSRVSATANEVASGSSSVSQGYDTRGKRPIEGDEFEFVLM 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10521900 10527421 + CaPI482276_07g005980.1 Cam07g0598 130891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0598 436 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam07g0598 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g0598 436 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Cam07g0598 436 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Cam07g0598 436 Pfam Protein tyrosine and serine/threonine kinase 53 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam07g0598 436 MobiDBLite consensus disorder prediction 344 368 - -
Cam07g0598 436 Gene3D Phosphorylase Kinase; domain 1 17 127 - -
Cam07g0598 436 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 358 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam07g0598 436 SUPERFAMILY Protein kinase-like (PK-like) 38 340 IPR011009 -
Cam07g0598 436 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Cam07g0598 436 CDD STKc_IRAK 58 324 - -
Cam07g0598 436 MobiDBLite consensus disorder prediction 390 429 - -
Cam07g0598 436 MobiDBLite consensus disorder prediction 390 419 - -
Cam07g0598 436 MobiDBLite consensus disorder prediction 327 368 - -
Cam07g0598 436 SMART serkin_6 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2747 Cam-Chr5:34734828 Cam07g0598 Cam-Chr7:10521900 1.50E-77 dispersed
Cam07g0598 Cam-Chr7:10521900 Cam10g0584 Cam-Chr10:8981569 1.60E-80 dispersed
Cam07g0598 Cam-Chr7:10521900 Cam01g2300 Cam-Chr1:35192918 5.90E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85303 PF00069 Pkinase 3.10E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0598 - - - 0.0