Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam07g0606 | ATGAACAATCGGGCTGGACTCCTTCGAATTCGTCTGCTTCGAGGCCACAATCTCGCCATTCGCGATGCTCCAACTCGTAGCAGCGATCCCTACGTCGTCATCTCCTGCGCTAACCAGAAATTCAAATCTCGCGTGGTGAAGAAAAACTGCAATCCAGAATGGAACGAGGAATTCACATTTTCGATTACAGATGTCAACACGGCAATCAAATTGGCAGTGTTCGACAAAGATAGATTCACGAAGGACGATGGAATGGGGGATGCGGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGATTAGAGAATCTGCCAAATGGTTGTGTGGTGAAAAGGGTTCAACCAAGCAGATCAAACAGCCTTGCAGATGAGAGTTCTTGTGTTTGGAACGATGGTAAGATCATCCAAGACATGACTCTCAGATTGCAGAATGTTGAATGTGGTGAAATCATGATTCAGCTTCAGATGTTTAATGTTTCGATTTTCAAAGGCCTAAGAACCTACTCTTTAGCCTGA | 522 | 44.25 | MNNRAGLLRIRLLRGHNLAIRDAPTRSSDPYVVISCANQKFKSRVVKKNCNPEWNEEFTFSITDVNTAIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLENLPNGCVVKRVQPSRSNSLADESSCVWNDGKIIQDMTLRLQNVECGEIMIQLQMFNVSIFKGLRTYSLA | 173 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 10706177 | 10707445 | - | CaPI482276_07g006060.1 | Cam07g0606 | 130899 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam07g0606 | 173 | CDD | C2_ArfGAP | 6 | 150 | - | - | |
| Cam07g0606 | 173 | SMART | C2_3c | 7 | 104 | IPR000008 | - | |
| Cam07g0606 | 173 | Pfam | C2 domain | 6 | 94 | IPR000008 | - | |
| Cam07g0606 | 173 | PRINTS | C2 domain signature | 48 | 61 | IPR000008 | - | |
| Cam07g0606 | 173 | PRINTS | C2 domain signature | 24 | 36 | IPR000008 | - | |
| Cam07g0606 | 173 | PRINTS | C2 domain signature | 69 | 77 | IPR000008 | - | |
| Cam07g0606 | 173 | Gene3D | C2 domain | 2 | 165 | IPR035892 | - | |
| Cam07g0606 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 161 | IPR035892 | - | |
| Cam07g0606 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 162 | IPR044562 | - | |
| Cam07g0606 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 108 | IPR000008 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g0643 | Cam-Chr1:7019347 | Cam07g0606 | Cam-Chr7:10706177 | 7.00E-59 | dispersed | |
| Cam05g1283 | Cam-Chr5:12913716 | Cam07g0606 | Cam-Chr7:10706177 | 7.70E-47 | dispersed | |
| Cam07g0606 | Cam-Chr7:10706177 | Cam06g1572 | Cam-Chr6:27195315 | 3.00E-49 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam07g0606 | - | - | - | 0.0 |