Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam07g0779 ATGGCTTCGAATGCTACGGCAGTGACCACATGTCCAACTCCAATGAAAGCAACATCAAACGGGATTTTCCAAGGCGATAATCCTCTTGATTTTGCTCTCCCTCTTGTCATTCTGCAGATATGTTTGGTAGTCGCACTTACTCGTGGTCTTGCTTTTCTTCTCAGGCCGTTAAAACAGCCACGAGTGATTGGAGAAATTATTGGAGGAATACTTCTAGGACCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATACGATATTTCCATCCAATAGTATGACATTGTTAGATACCATAGCAAACATTGGGTTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCCTTGGCATTGCCATTACTGGAATTTGCGTTCCCTTTGCATTAGGAATTGGATCATCATTTGTCCTCCGAGGAACCATATCCAAAGGTGTAAATGCTTCTGCATTTCTCATATTCATGGGTGTTGCACTTTCGATAACAGCCTTTCCCGTCTTAGCTCGCATTCTTGCTGAGCTTAAACTACTGACGACTGATGTTGGCAGGATGGCTATGTCTGCTGCAGCAGTAAATGACGTAGCTGCCTGGATTCTCCTTGCTCTTGCCATTGCATTATCAGGTTCTGATAAATCTCCCCTAACTGCGGTTTGGGTCCTTTTATCTGGCTGTGGCTTTGTTGTGGCCGCTGTCGTCATTTTATCCCCAGTTTTCAAATGGATGACCAAGCAATGTTTTCAAGGGGAGCCTGTACGGGAAATCTACATATGCGCCACATTAGCTATTGTCCTAGCTGCTGGATTTGCCACGGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCCAAAGGATGGACCATTAGTGGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTGTACTTTGTCTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATTGTCACCGCCTGTTCTGGAAAAATCCTTGGCACTTTTCTAGTGTCCCTTCTTTGTAAAGTACCTGTTCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAGCCAGCAAGGAGTGCCAAATTAGCCGATTATAAACATAGGAAAATCGAACGGAAAAACAAGAATACGCAGCTTCGGATGTTGACCTGTTTCCATAGTGCAGGAAACATTCCATCAATTATAAATCTGCTTGAGGCCTCGAGAGGAATTCAGAAGGGAGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGCGGTCCTCAGCCATTTTAATGGTACATAAGGCCAGGAAAAATGGGTTGCCTTTCTGGAATAAGGGCCAGAGGTCAGATTCCAACCATGTTATCGTTGCGTTTGAAGCTTATCAACAACTGAGCAGAGTATTCATCCGAGCGATGACGGCCATTTCCTCCATGTCTGACATACATGAAGATATCTGTGCTACTGCCGAGAGGAAAAGAACTGCAATCATAATTCTTCCATTCCACAAGCACCAGAGGGTGGATGGTTCCCTGGAGACTACTCAAAGCAGCATCCGTGTTGTTAATCAGAATGTCCTCGAGCATGCTCAATGTTCAGTTGGAATTTTCGTTGATCGGGGGTTGGGTGGAACAACCCATGTTTCTTCGAGCAATGTTTCACTTTTCATTGCTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCACTTTCTTATGGAGTTCGTATGGCTGAGCACCCTGGCATTAGGTTGATGGTTATTCGTTTCTTTGTTGAACCCGAGCCTGTTGGGGAGATAGTCAGTGCTGATACTGTTGGGAATTCTTCTGCTAAGATGGTTTCTCAGGATGATGAATTTCTTTCTGAGTTCAGGAACAATGTGAGCAATAACGATTCCGTCATATATGTAGAGAAAACCATAAAAAGTGCTGCAGAAGCAATGGATACAGTACAGGAGCTGAAAAACTGCAACCTGTATCTTGTTGGTCGAACACCGGATGTCAATTCAACCTTTGTCTTAAACAGAAGTGACTGTCCGGAGCTTGGTCCAGTTGGGAACCTGTTGACTTCACCGAACTTCACGATTTCAGCGTCGGTTTTGGTGGTGCAGCAATATCGTTCTGAGTTACTGGTGAATTCGGCTTCAGATTCTGCTGATGGAGAATCAGAATCATCATAA 2400 43.33 MASNATAVTTCPTPMKATSNGIFQGDNPLDFALPLVILQICLVVALTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKNFLHTIFPSNSMTLLDTIANIGLLFFLFLVGLELDLKSIRRTGKKALGIAITGICVPFALGIGSSFVLRGTISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCGFVVAAVVILSPVFKWMTKQCFQGEPVREIYICATLAIVLAAGFATDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACSGKILGTFLVSLLCKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKLADYKHRKIERKNKNTQLRMLTCFHSAGNIPSIINLLEASRGIQKGEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSRVFIRAMTAISSMSDIHEDICATAERKRTAIIILPFHKHQRVDGSLETTQSSIRVVNQNVLEHAQCSVGIFVDRGLGGTTHVSSSNVSLFIAVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPEPVGEIVSADTVGNSSAKMVSQDDEFLSEFRNNVSNNDSVIYVEKTIKSAAEAMDTVQELKNCNLYLVGRTPDVNSTFVLNRSDCPELGPVGNLLTSPNFTISASVLVVQQYRSELLVNSASDSADGESESS 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19163351 19166126 - CaPI482276_07g007790.1 Cam07g0779 131072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam07g0779 799 Gene3D - 35 438 IPR038770 -
Cam07g0779 799 FunFam Cation/H(+) antiporter 15 35 437 - -
Cam07g0779 799 PANTHER CATION/H + ANTIPORTER 11 787 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cam07g0779 799 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0056 Cam-Chr2:1682630 Cam07g0779 Cam-Chr7:19163351 6.80E-203 dispersed
Cam04g0260 Cam-Chr4:8736497 Cam07g0779 Cam-Chr7:19163351 1.60E-138 dispersed
Cam07g0779 Cam-Chr7:19163351 Cam10g1157 Cam-Chr10:24772170 1.00E-104 dispersed
Cam07g0776 Cam-Chr7:19015887 Cam07g0779 Cam-Chr7:19163351 6.90E-295 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam07g0779 K26731 - csv:101223205 1409.82